RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 CKBP12277 381 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 PBX1P40424 430 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
TNRC18-202ENST00000399434 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.42
TNRC18-202ENST00000399434 SNRNP35Q16560 246 aaKnown RBP17.69■□□□□ 0.42
TNRC18-202ENST00000399434 ZNF568Q3ZCX4 644 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 SEZ6Q53EL9 994 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 C1orf220Q5T0J3 134 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 ZNF618Q5T7W0 954 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 SLFN12LQ6IEE8 588 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 SLC39A5Q6ZMH5 540 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 CATSPER4Q7RTX7 472 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 CEP120Q8N960 986 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 RDH13Q8NBN7 331 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 SLC35C1Q96A29 364 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 AGO2Q9UKV8 859 aaKnown RBP17.69■□□□□ 0.42
TNRC18-202ENST00000399434 FRMD4BQ9Y2L6 1034 aa17.69■□□□□ 0.42
TNRC18-202ENST00000399434 SCN5AQ14524 2016 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 A0A1B0GUA9 196 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 CLDN3O15551 220 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 MEFVO15553 781 aaPredicted RBP17.68■□□□□ 0.42
TNRC18-202ENST00000399434 CAND2O75155 1236 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 ERLIN2O94905 339 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
TNRC18-202ENST00000399434 SFPQP23246 707 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■□□□□ 11.3
TNRC18-202ENST00000399434 TNFSF9P41273 254 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 MBTPS1Q14703 1052 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 VWA3BQ502W6 1294 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 FBXO47Q5MNV8 452 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 MFSD14AQ96MC6 490 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 FAM213AQ9BRX8 229 aa17.68■□□□□ 0.42
TNRC18-202ENST00000399434 NOC4LQ9BVI4 516 aaKnown RBP17.68■□□□□ 0.42
TNRC18-202ENST00000399434 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
TNRC18-202ENST00000399434 CITO14578 2027 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 M0QZ92 97 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 N4BP3O15049 544 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 KIAA0391O15091 583 aaKnown RBP17.67■□□□□ 0.42
TNRC18-202ENST00000399434 PQBP1O60828 265 aaKnown RBP17.67■□□□□ 0.42
TNRC18-202ENST00000399434 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 CDC25BP30305 580 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 ACOT2P49753 483 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 DLG4P78352 724 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 CYP24A1Q07973 514 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 BFSP1Q12934 665 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 LPIN1Q14693 890 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 PCBP1Q15365 356 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■■□□ 15.5
TNRC18-202ENST00000399434 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
TNRC18-202ENST00000399434 CCDC155Q8N6L0 562 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 NDST4Q9H3R1 872 aa17.67■□□□□ 0.42
TNRC18-202ENST00000399434 METTL14Q9HCE5 456 aaKnown RBP17.67■□□□□ 0.42
TNRC18-202ENST00000399434 OGTO15294 1046 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 CBFA2T2O43439 604 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 MCF2P10911 925 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
TNRC18-202ENST00000399434 UBXN11Q5T124 520 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 C1orf53Q5VUE5 145 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 VSTM4Q8IW00 320 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 TMEM192Q8IY95 271 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 PAWRQ96IZ0 340 aaKnown RBP17.66■□□□□ 0.42
TNRC18-202ENST00000399434 FAM84AQ96KN4 292 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 ERVK-5Q9HDB9 667 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 CPSF3Q9UKF6 684 aaKnown RBP17.66■□□□□ 0.42
TNRC18-202ENST00000399434 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.66■□□□□ 0.42
TNRC18-202ENST00000399434 TRIP11Q15643 1979 aa17.66■□□□□ 0.42
TNRC18-202ENST00000399434 GHRP10912 638 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 TMEM132AQ24JP5 1023 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 DCAF17Q5H9S7 520 aaPredicted RBP17.65■□□□□ 0.42
TNRC18-202ENST00000399434 INTS8Q75QN2 995 aaKnown RBP17.65■□□□□ 0.42
TNRC18-202ENST00000399434 UBE2Q1Q7Z7E8 422 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 PPP1R9BQ96SB3 815 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 TCHPQ9BT92 498 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 EIF2AQ9BY44 585 aaKnown RBP17.65■□□□□ 0.42
TNRC18-202ENST00000399434 C11orf49Q9H6J7 331 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 TOPORSQ9NS56 1045 aaPredicted RBP17.65■□□□□ 0.42
TNRC18-202ENST00000399434 PTPRJQ12913 1337 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 UMODL1Q5DID0 1318 aa17.65■□□□□ 0.42
TNRC18-202ENST00000399434 RPS6KA5O75582 802 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 NPTXRO95502 500 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 CD52P31358 61 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 VAMP7P51809 220 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 TLE2Q04725 743 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 FAAP100Q0VG06 881 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 KCNH2Q12809 1159 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 GPNMBQ14956 572 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 PSMD6Q15008 389 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 LRRC26Q2I0M4 334 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 FILIP1LQ4L180 1135 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.64■□□□□ 0.41
TNRC18-202ENST00000399434 BRSK2Q8IWQ3 736 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 THNSL1Q8IYQ7 743 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 CAGE1Q8TC20 777 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 PARD3BQ8TEW8 1205 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 TMEM106CQ9BVX2 250 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 KIAA1586Q9HCI6 787 aa17.64■□□□□ 0.41
TNRC18-202ENST00000399434 ST3GAL5Q9UNP4 418 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms