RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ZDHHC14Q8IZN3 488 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 MAB21L3Q8N8X9 362 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 LZTS2Q9BRK4 669 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 PSTPIP2Q9H939 334 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 SLC5A4Q9NY91 659 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 KLHL14Q9P2G3 628 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 HAO1Q9UJM8 370 aa10.61□□□□□ -0.71
PTCHD4-202ENST00000398738 COL18A1P39060 1754 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 DLATP10515 647 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 NMT1P30419 496 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 BTDP43251 543 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CTCFP49711 727 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 MXRA7P84157 204 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 ITPK1Q13572 414 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 MPP2Q14168 576 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 EPHA7Q15375 998 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 ARMC3Q5W041 872 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 EIF1ADQ8N9N8 165 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 GRHL1Q9NZI5 618 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 FKBPLQ9UIM3 349 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CICQ96RK0 1608 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CES2O00748 559 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 SNPHO15079 494 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CLSTN1O94985 981 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 FTLP02792 175 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 ZBTB48P10074 688 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CYP4F22Q6NT55 531 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 INTS8Q75QN2 995 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 ATG4AQ8WYN0 398 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 SLC35C1Q96A29 364 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 ERP27Q96DN0 273 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 NAF1Q96HR8 494 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 DHX36Q9H2U1 1008 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CDC42EP4Q9H3Q1 356 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 RGL1Q9NZL6 768 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 PFASO15067 1338 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 A0A1W2PRG0 241 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 ZBTB39O15060 712 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 TBCAO75347 108 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 NUDT17P0C025 328 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 HOXD13P35453 343 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 GRIK3Q13003 919 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 DPP8Q6V1X1 898 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 SLFN11Q7Z7L1 901 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 KIAA0825Q8IV33 1275 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 FAM186BQ8IYM0 893 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CCHCR1Q8TD31 782 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 RPGRQ92834 1020 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 CRAMP1Q96RY5 1269 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 NAP1L3Q99457 506 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 RUSC1Q9BVN2 902 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 BATF3Q9NR55 127 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 PCDHA2Q9Y5H9 948 aa10.6□□□□□ -0.71
PTCHD4-202ENST00000398738 LOC102724428A0A0B4J2F2 783 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 DPPA5A6NC42 116 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 PYGMP11217 842 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 FERP16591 822 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 COMTP21964 271 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 POLD1P28340 1107 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 SOX5P35711 763 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 CHKAP35790 457 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 GJC1P36383 396 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 SIK1P57059 783 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 DNAJC3Q13217 504 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 CATSPER3Q86XQ3 398 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 CYP4X1Q8N118 509 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 MYCT1Q8N699 235 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 C9orf72Q96LT7 481 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 PITPNM3Q9BZ71 974 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 TXLNGYQ9BZA5 131 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 NT5C3AQ9H0P0 336 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 PRM3Q9NNZ6 103 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 SIX2Q9NPC8 291 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 CPSF2Q9P2I0 782 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 ARL2BPQ9Y2Y0 163 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 COL14A1Q05707 1796 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 FOXN3O00409 490 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 CALUO43852 315 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 TUBP50607 506 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 BNIP1Q12981 228 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 IKQ13123 557 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 SEL1L2Q5TEA6 688 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 RFX8Q6ZV50 586 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 COL23A1Q86Y22 540 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 TRIM7Q9C029 511 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
PTCHD4-202ENST00000398738 SLIT2O94813 1529 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 CLDN3O15551 220 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 THAP12O43422 761 aa10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 PPP1R11O60927 126 aaPredicted RBP10.58□□□□□ -0.72
PTCHD4-202ENST00000398738 ENTPD5O75356 428 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms