RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 KRT31Q15323 416 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 TOGARAM2Q6ZUX3 1019 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 PCSK9Q8NBP7 692 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 MRPL4Q9BYD3 311 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 SRGAP2O75044 1071 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 PBXIP1Q96AQ6 731 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 CAMKK2Q96RR4 588 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 STRIP2Q9ULQ0 834 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 ATP11BQ9Y2G3 1177 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 UBE4BO95155 1302 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 FGGP02679 453 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 NUDT18Q6ZVK8 323 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 CENPUQ71F23 418 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 LXNQ9BS40 222 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 FMN2Q9NZ56 1722 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 POTECB2RU33 542 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 NFIAQ12857 509 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 NOGQ13253 232 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 SNCBQ16143 134 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 RGMBQ6NW40 437 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 ALKBH5Q6P6C2 394 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 DHX38Q92620 1227 aaKnown RBP15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 CCDC138Q96M89 665 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 SCINQ9Y6U3 715 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 HMBSP08397 361 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 PAMP19021 973 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 CEP55Q53EZ4 464 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 SAYSD1Q9NPB0 183 aa15.15■□□□□ 0.02
PCDHA11-201ENST00000398640 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 TJP3O95049 919 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 EEF1B2P24534 225 aaKnown RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 SPATA2LQ8IUW3 424 aaPredicted RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 CNOT8Q9UFF9 292 aaKnown RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 PCSK1NQ9UHG2 260 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 RASGRF2O14827 1237 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 SPATS2Q86XZ4 545 aaKnown RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 ZMYND12Q9H0C1 365 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 DOLKQ9UPQ8 538 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 C17orf102A2RUQ5 167 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 SNX2O60749 519 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 RCOR1Q9UKL0 485 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 RPS6KA5O75582 802 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 KYAT1Q16773 422 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 BTBD8Q5XKL5 378 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 PDIK1LQ8N165 341 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 NLGN2Q8NFZ4 835 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 KLC2Q9H0B6 622 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 CCDC85CA6NKD9 419 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 PRRG1O14668 218 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 HSPA4LO95757 839 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 VIL1P09327 827 aaKnown RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 RALAP11233 206 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 NNTQ13423 1086 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 CUL4AQ13619 759 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 DACT2Q5SW24 774 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 BZW1Q7L1Q6 419 aaKnown RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 TXNRD3Q86VQ6 643 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 FMO2Q99518 471 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 RTFDC1Q9BY42 306 aaPredicted RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 FAF1Q9UNN5 650 aaPredicted RBP15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 ADAMTSL3P82987 1691 aa15.14■□□□□ 0.01
PCDHA11-201ENST00000398640 IQANK1A0A1B0GTG1 560 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 DFFAO00273 331 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 FKTNO75072 461 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 ASMTLO95671 621 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 NR3C1P04150 777 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 RNF149Q8NC42 400 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 PDHBP11177 359 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 PPATQ06203 517 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 KCNA1Q09470 495 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 VSTM4Q8IW00 320 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 NCLNQ969V3 563 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 PCDHB7Q9Y5E2 793 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 TAF1BQ53T94 588 aaPredicted RBP15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 TAS2R42Q7RTR8 314 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 TTC17Q96AE7 1141 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 KIAA1586Q9HCI6 787 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 ZC3H4Q9UPT8 1303 aaKnown RBP15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 GLTPD2A6NH11 291 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 MAGEB2O15479 319 aa15.13■□□□□ 0.01
PCDHA11-201ENST00000398640 PALMO75781 387 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms