RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 RNF39Q9H2S5 420 aa19.01■□□□□ 0.63
CSNK1D-204ENST00000398519 TMEM206Q9H813 350 aa19.01■□□□□ 0.63
CSNK1D-204ENST00000398519 RNF19AQ9NV58 838 aa19.01■□□□□ 0.63
CSNK1D-204ENST00000398519 RNF216Q9NWF9 866 aaPredicted RBP19.01■□□□□ 0.63
CSNK1D-204ENST00000398519 GDAQ9Y2T3 454 aa19.01■□□□□ 0.63
CSNK1D-204ENST00000398519 CLDN3O15551 220 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 GATMP50440 423 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 MCL1Q07820 350 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 NOLC1Q14978 699 aaKnown RBP eCLIP19■□□□□ 0.63
CSNK1D-204ENST00000398519 AGMOQ6ZNB7 445 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 NELFCDQ8IXH7 590 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 SYCP3Q8IZU3 236 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 ZNF689Q96CS4 500 aaPredicted RBP19■□□□□ 0.63
CSNK1D-204ENST00000398519 PBX4Q9BYU1 374 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 NUP62CLQ9H1M0 184 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 MAN1B1Q9UKM7 699 aa19■□□□□ 0.63
CSNK1D-204ENST00000398519 TLL1O43897 1013 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 MCF2P10911 925 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 HARSP12081 509 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 MYOGP15173 224 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 PBX2P40425 430 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 CLLU1OSQ5K130 101 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 APBB1IPQ7Z5R6 666 aaPredicted RBP18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 SMYD4Q8IYR2 804 aaPredicted RBP18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 CEP120Q8N960 986 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 PGBD4Q96DM1 585 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 YME1L1Q96TA2 773 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 RAD9AQ99638 391 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 APOL6Q9BWW8 343 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 KIAA1468Q9P260 1216 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 STYXL1Q9Y6J8 313 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 CHD9Q3L8U1 2897 aa18.99■□□□□ 0.63
CSNK1D-204ENST00000398519 A0A0B4J269 797 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 ITGA4P13612 1032 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 AKAP5P24588 427 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 ADSSP30520 456 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 MATR3P43243 847 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■□□□ 13.8
CSNK1D-204ENST00000398519 SMAD3P84022 425 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 ZNF658Q5TYW1 1059 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 INSL6Q9Y581 213 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 PCDHA11Q9Y5I1 949 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 LCHNA4D1U4 455 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 TGFB1I1O43294 461 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 HOXA2O43364 376 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 FAM189A1O60320 539 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 ISM2Q6H9L7 571 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 HACE1Q8IYU2 909 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 HELQQ8TDG4 1101 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 GBP3Q9H0R5 595 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 RSAD1Q9HA92 442 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 SNTG2Q9NY99 539 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 MAPK8IP1Q9UQF2 711 aa18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 YBX2Q9Y2T7 364 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-204ENST00000398519 FNDC1Q4ZHG4 1894 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 BMP6P22004 513 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 GRM5P41594 1212 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 OSTNP61366 133 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 KNOP1Q1ED39 458 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 SEZ6Q53EL9 994 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 SLFN12LQ6IEE8 588 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 TMEM192Q8IY95 271 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 THNSL1Q8IYQ7 743 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 SP7Q8TDD2 431 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 POMGNT1Q8WZA1 660 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 CASD1Q96PB1 797 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 MSTO1Q9BUK6 570 aa18.97■□□□□ 0.63
CSNK1D-204ENST00000398519 TBKBP1A7MCY6 615 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 BIN1O00499 593 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 SOX1O00570 391 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 OFD1O75665 1012 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 RECQL4O94761 1208 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 AFF1P51825 1210 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 MORC3Q14149 939 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 RAB30Q15771 203 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 PAN2Q504Q3 1202 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 ZBTB41Q5SVQ8 909 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 GLB1LQ6UWU2 654 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 ABI1Q8IZP0 508 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 GUF1Q8N442 669 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 CBWD1Q9BRT8 395 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 TMEM117Q9H0C3 514 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 KCTD10Q9H3F6 313 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 UBN1Q9NPG3 1134 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 AGPAT3Q9NRZ7 376 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 GIT1Q9Y2X7 761 aa18.96■□□□□ 0.63
CSNK1D-204ENST00000398519 OGTO15294 1046 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 ARHGEF15O94989 841 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 CA3P07451 260 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 GARTP22102 1010 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 DNAJB2P25686 324 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 MLH1P40692 756 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 COBLL1Q53SF7 1204 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 HABP4Q5JVS0 413 aaKnown RBP18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 CMTR2Q8IYT2 770 aaKnown RBP18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 ZFP42Q96MM3 310 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 GAD1Q99259 594 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 CCDC94Q9BW85 323 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 KLK14Q9P0G3 267 aa18.95■□□□□ 0.62
CSNK1D-204ENST00000398519 MSRAQ9UJ68 235 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms