RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 A0A0U1RQG5 324 aaPredicted RBP29.95■■■□□ 2.38
CPNE1-203ENST00000397442 MATR3P43243 847 aaKnown RBP eCLIP29.95■■■□□ 2.38
CPNE1-203ENST00000397442 ACOT2P49753 483 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 VAMP7P51809 220 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 SYCP1Q15431 976 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 PKN2Q16513 984 aaKnown RBP29.95■■■□□ 2.38
CPNE1-203ENST00000397442 ZBTB33Q86T24 672 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 CPB2Q96IY4 423 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 TCHPQ9BT92 498 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 PDZD7Q9H5P4 517 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 SIK3Q9Y2K2 1263 aa29.95■■■□□ 2.38
CPNE1-203ENST00000397442 GOLGA6L6A8MZA4 724 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 ERLIN2O94905 339 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 PTMAP06454 111 aaKnown RBP29.94■■■□□ 2.38
CPNE1-203ENST00000397442 TRIM49P0CI25 452 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 TRIM49CP0CI26 452 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 KRT13P13646 458 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 CYP24A1Q07973 514 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 NOLC1Q14978 699 aaKnown RBP eCLIP29.94■■■□□ 2.383e-8■□□□□ 8.2
CPNE1-203ENST00000397442 DHX38Q92620 1227 aaKnown RBP29.94■■■□□ 2.38
CPNE1-203ENST00000397442 CRISPLD2Q9H0B8 497 aa29.94■■■□□ 2.38
CPNE1-203ENST00000397442 LDHAP00338 332 aaKnown RBP29.93■■■□□ 2.38
CPNE1-203ENST00000397442 KLK7P49862 253 aa29.93■■■□□ 2.38
CPNE1-203ENST00000397442 KCNMA1Q12791 1236 aa29.93■■■□□ 2.38
CPNE1-203ENST00000397442 PTK7Q13308 1070 aa29.93■■■□□ 2.38
CPNE1-203ENST00000397442 PCBP1Q15365 356 aaKnown RBP eCLIP29.93■■■□□ 2.381e-8■■■■■ 43
CPNE1-203ENST00000397442 RSPH3Q86UC2 560 aa29.93■■■□□ 2.38
CPNE1-203ENST00000397442 CDT1Q9H211 546 aa29.93■■■□□ 2.38
CPNE1-203ENST00000397442 CDY2AQ9Y6F7 541 aa29.93■■■□□ 2.38
CPNE1-203ENST00000397442 A0A1B0GUA9 196 aa29.92■■■□□ 2.38
CPNE1-203ENST00000397442 ZNF233A6NK53 670 aa29.92■■■□□ 2.38
CPNE1-203ENST00000397442 RPLP2P05387 115 aaKnown RBP29.92■■■□□ 2.38
CPNE1-203ENST00000397442 HARSP12081 509 aaKnown RBP29.92■■■□□ 2.38
CPNE1-203ENST00000397442 HOXA11P31270 313 aaPredicted RBP29.92■■■□□ 2.38
CPNE1-203ENST00000397442 TRIM71Q2Q1W2 868 aaKnown RBP29.92■■■□□ 2.38
CPNE1-203ENST00000397442 ZNF568Q3ZCX4 644 aa29.92■■■□□ 2.38
CPNE1-203ENST00000397442 PARD3BQ8TEW8 1205 aa29.92■■■□□ 2.38
CPNE1-203ENST00000397442 RBAK-RBAKDNI3L0D1 243 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 ARVCFO00192 962 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 OGTO15294 1046 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 CHRNA1P02708 482 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 MGAT3Q09327 533 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 ARID5BQ14865 1188 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 TMEM132AQ24JP5 1023 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 SEZ6Q53EL9 994 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 TMC2Q8TDI7 906 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 SENP6Q9GZR1 1112 aaPredicted RBP29.91■■■□□ 2.38
CPNE1-203ENST00000397442 TRPV2Q9Y5S1 764 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 B4GALT4O60513 344 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 MNX1P50219 401 aaPredicted RBP29.91■■■□□ 2.38
CPNE1-203ENST00000397442 WNT7BP56706 349 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 ENPEPQ07075 957 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 CATSPER4Q7RTX7 472 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 TRPV6Q9H1D0 765 aa29.91■■■□□ 2.38
CPNE1-203ENST00000397442 GYPCP04921 128 aa29.9■■■□□ 2.38
CPNE1-203ENST00000397442 TNFSF9P41273 254 aa29.9■■■□□ 2.38
CPNE1-203ENST00000397442 FMO5P49326 533 aa29.9■■■□□ 2.38
CPNE1-203ENST00000397442 CDK7P50613 346 aa29.9■■■□□ 2.38
CPNE1-203ENST00000397442 PPP3CAQ08209 521 aa29.9■■■□□ 2.38
CPNE1-203ENST00000397442 U2AF1L4Q8WU68 220 aaKnown RBP29.9■■■□□ 2.38
CPNE1-203ENST00000397442 M0QZ92 97 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 SGPL1O95470 568 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 CTSHP09668 335 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 SFPQP23246 707 aaKnown RBP eCLIP29.89■■■□□ 2.388e-7■□□□□ 11.1
CPNE1-203ENST00000397442 CBWD6Q4V339 395 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 CBWD3Q5JTY5 395 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 CBWD5Q5RIA9 395 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 CCDC127Q96BQ5 260 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 CPSF3Q9UKF6 684 aaKnown RBP29.89■■■□□ 2.38
CPNE1-203ENST00000397442 NOD1Q9Y239 953 aa29.89■■■□□ 2.38
CPNE1-203ENST00000397442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.89■■■□□ 2.388e-7■□□□□ 11.3
CPNE1-203ENST00000397442 LRRIQ3A6PVS8 624 aaPredicted RBP29.88■■■□□ 2.37
CPNE1-203ENST00000397442 MCF2P10911 925 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 THPOP40225 353 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 RBL2Q08999 1139 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 HSP90AA2PQ14568 343 aaPredicted RBP29.88■■■□□ 2.37
CPNE1-203ENST00000397442 PSMD6Q15008 389 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 CEP120Q8N960 986 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 CRACR2AQ9BSW2 395 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 TTYH3Q9C0H2 523 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 AGPAT5Q9NUQ2 364 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 RBAKQ9NYW8 714 aaPredicted RBP29.88■■■□□ 2.37
CPNE1-203ENST00000397442 GTPBP10A4D1E9 387 aaKnown RBP29.88■■■□□ 2.37
CPNE1-203ENST00000397442 GSDMDP57764 484 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 POP1Q99575 1024 aaKnown RBP29.88■■■□□ 2.37
CPNE1-203ENST00000397442 SEZ6LQ9BYH1 1024 aa29.88■■■□□ 2.37
CPNE1-203ENST00000397442 NOC2LQ9Y3T9 749 aaKnown RBP29.88■■■□□ 2.37
CPNE1-203ENST00000397442 RNF225M0QZC1 329 aaPredicted RBP29.87■■■□□ 2.37
CPNE1-203ENST00000397442 CLDN10P78369 228 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 GOLGA8FQ08AF8 430 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 GOLGA8DPQ0D2H9 430 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 DPY19L2P1Q6NXN4 242 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 FAM228AQ86W67 206 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 BRSK2Q8IWQ3 736 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 THNSL1Q8IYQ7 743 aa29.87■■■□□ 2.37
CPNE1-203ENST00000397442 FXR1P51114 621 aaKnown RBP eCLIP29.86■■■□□ 2.37
CPNE1-203ENST00000397442 CACTINQ8WUQ7 758 aaKnown RBP29.86■■■□□ 2.37
CPNE1-203ENST00000397442 MMRN2Q9H8L6 949 aa29.86■■■□□ 2.37
CPNE1-203ENST00000397442 PDE11AQ9HCR9 933 aa29.86■■■□□ 2.37
CPNE1-203ENST00000397442 TOPORSQ9NS56 1045 aaPredicted RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms