RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 APBB1IPQ7Z5R6 666 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 GAS2L1Q99501 681 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 CDT1Q9H211 546 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 ST6GALNAC4Q9H4F1 302 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 CWH43Q9H720 699 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 UBN1Q9NPG3 1134 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 OLFML3Q9NRN5 406 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 ANKFY1Q9P2R3 1169 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 ABCD1P33897 745 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 MLH1P40692 756 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 GTF2BQ00403 316 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 MPZL3Q6UWV2 235 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 ZPBP2Q6X784 338 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 ZNF720Q7Z2F6 126 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 ZBTB33Q86T24 672 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 URGCPQ8TCY9 931 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 PAGE5Q96GU1 130 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 TCHPQ9BT92 498 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 PTPRHQ9HD43 1115 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 PARP2Q9UGN5 583 aa23.24■■□□□ 1.31
TSPAN4-206ENST00000397408 HNRNPDLO14979 420 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 TOM1L1O75674 476 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 GCNT3O95395 438 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 HARSP12081 509 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 FOSL2P15408 326 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 PROZP22891 400 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 LIG4P49917 911 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 AFF1P51825 1210 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 CUL4BQ13620 913 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 ADGRE1Q14246 886 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 MAP4K3Q8IVH8 894 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 ZFP42Q96MM3 310 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 GAD1Q99259 594 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 FGFBP2Q9BYJ0 223 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 TBC1D13Q9NVG8 400 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 SNTG2Q9NY99 539 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 GIT1Q9Y2X7 761 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 TRANK1O15050 2925 aa23.23■■□□□ 1.31
TSPAN4-206ENST00000397408 ARL5CA6NH57 179 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 C5orf67F2Z3F1 127 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 ABLIM1O14639 778 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 PPP1R37O75864 691 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 LAG3P18627 525 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 CASP5P51878 434 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 UNC13DQ70J99 1090 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 HVCN1Q96D96 273 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 ZBTB45Q96K62 511 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 AAASQ9NRG9 546 aa23.22■■□□□ 1.31
TSPAN4-206ENST00000397408 RECQL4O94761 1208 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 ZNF202O95125 648 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 POMCP01189 267 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 PIGRP01833 764 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 RB1P06400 928 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 MYBP10242 640 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 MCF2P10911 925 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 MATR3P43243 847 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 RNASELQ05823 741 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 GPM6BQ13491 265 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 NOLC1Q14978 699 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 CEP120Q8N960 986 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 COLGALT1Q8NBJ5 622 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 HPS3Q969F9 1004 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 C11orf84Q9BUA3 381 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 PLVAPQ9BX97 442 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 KLK14Q9P0G3 267 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 GDAQ9Y2T3 454 aa23.21■■□□□ 1.31
TSPAN4-206ENST00000397408 H3BNC9 293 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 INPPL1O15357 1258 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 LPXNO60711 386 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 IGFBP4P22692 258 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 PBX3P40426 434 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 SCNN1GP51170 649 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 KRBA2Q6ZNG9 492 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 STRA6Q9BX79 667 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 PCDHB12Q9Y5F1 795 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 ZMYM2Q9UBW7 1377 aa23.2■■□□□ 1.3
TSPAN4-206ENST00000397408 CLDN3O15551 220 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 GTPBP6O43824 516 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 ZC3H11AO75152 810 aaKnown RBP eCLIP23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 GRM5P41594 1212 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 OSTNP61366 133 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 MCL1Q07820 350 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 ALCAMQ13740 583 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 FAM26FQ5R3K3 315 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 L1TD1Q5T7N2 865 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 FMR1NBQ8N0W7 255 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 KLHL23Q8NBE8 558 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 TMEM87AQ8NBN3 555 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 P2RX5Q93086 422 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 ZNF558Q96NG5 402 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 RPS6KC1Q96S38 1066 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 CCDC94Q9BW85 323 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 NRDE2Q9H7Z3 1164 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 KANSL3Q9P2N6 904 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 PCDHB13Q9Y5F0 798 aa23.19■■□□□ 1.3
TSPAN4-206ENST00000397408 PVALEFA0A1B0GWK0 134 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 FAM160A1Q05DH4 1040 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 KCNA1Q09470 495 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 SLC39A4Q6P5W5 647 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms