RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
SEC13-204ENST00000397099 TMEM119Q4V9L6 283 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 GPR65Q8IYL9 337 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 VPS52Q8N1B4 723 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 SPIRE2Q8WWL2 714 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 BSNDQ8WZ55 320 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 GAD1Q99259 594 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 MRPL4Q9BYD3 311 aaKnown RBP15.35■□□□□ 0.05
SEC13-204ENST00000397099 GBP3Q9H0R5 595 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 NXF3Q9H4D5 531 aaKnown RBP15.35■□□□□ 0.05
SEC13-204ENST00000397099 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 KMT5AQ9NQR1 393 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 ARHGAP28Q9P2N2 729 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 C2orf71A6NGG8 1288 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 STX6O43752 255 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 CXCL14O95715 111 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 GLP2RO95838 553 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 POMCP01189 267 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
SEC13-204ENST00000397099 PLA2G4BP0C869 781 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 PLS3P13797 630 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 CA8P35219 290 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 TXLNAP40222 546 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 MLH1P40692 756 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 NPTX2P47972 431 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 SLC12A3P55017 1021 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 DSC1Q08554 894 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 TPRNQ4KMQ1 711 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 ATF7IP2Q5U623 682 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 ZNF280BQ86YH2 543 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 COLGALT2Q8IYK4 626 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 SMRP1Q8NCR6 262 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 CASP10Q92851 521 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 KCNN1Q92952 543 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 PNMA5Q96PV4 448 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 COLEC11Q9BWP8 271 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 CCSER1Q9C0I3 900 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 ZBP1Q9H171 429 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 CLEC1BQ9P126 229 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 TNFSF13BQ9Y275 285 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 HCN4Q9Y3Q4 1203 aa15.34■□□□□ 0.05
SEC13-204ENST00000397099 NT5C1B-RDH14C9J2C7 533 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 NRP1O14786 923 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 DCXO43602 365 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 GPR37L1O60883 481 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 DDHD2O94830 711 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 C1RP00736 705 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 SSBP05455 408 aaKnown RBP eCLIP15.33■□□□□ 0.04
SEC13-204ENST00000397099 STRN3Q13033 797 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 ELMSAN1Q6PJG2 1045 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 DAW1Q8N136 415 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 RUSC1Q9BVN2 902 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 EMILIN2Q9BXX0 1053 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 MRPL17Q9NRX2 175 aaKnown RBP15.33■□□□□ 0.04
SEC13-204ENST00000397099 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
SEC13-204ENST00000397099 DZANK1Q9NVP4 752 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 DPP7Q9UHL4 492 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 HES2Q9Y543 173 aa15.33■□□□□ 0.04
SEC13-204ENST00000397099 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
SEC13-204ENST00000397099 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.33■□□□□ 0.04
SEC13-204ENST00000397099 TRIOO75962 3097 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.32■□□□□ 0.04
SEC13-204ENST00000397099 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 HIDE1A8MVS5 230 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 SOD2P04179 222 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 THP07101 528 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 OR1G1P47890 313 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 SCNN1GP51170 649 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 RBM10P98175 930 aaKnown RBP15.32■□□□□ 0.04
SEC13-204ENST00000397099 CREMQ03060 361 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 RESTQ13127 1097 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 MAPK7Q13164 816 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 KCNC3Q14003 757 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 LLGL2Q6P1M3 1020 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 KCNK18Q7Z418 384 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 APOL6Q9BWW8 343 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 C11orf16Q9NQ32 467 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
SEC13-204ENST00000397099 USP15Q9Y4E8 981 aaPredicted RBP15.32■□□□□ 0.04
SEC13-204ENST00000397099 URODP06132 367 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 LIG1P18858 919 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 AKAP5P24588 427 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 DDIT3P35638 169 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
SEC13-204ENST00000397099 ITIH3Q06033 890 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 TUSC3Q13454 348 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 CES5AQ6NT32 575 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 TMEM173Q86WV6 379 aaPredicted RBP15.31■□□□□ 0.04
SEC13-204ENST00000397099 GSTCDQ8NEC7 633 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 VN1R2Q8NFZ6 395 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 ZFP42Q96MM3 310 aa15.31■□□□□ 0.04
SEC13-204ENST00000397099 ZNF396Q96N95 335 aaPredicted RBP15.31■□□□□ 0.04
SEC13-204ENST00000397099 ACO2Q99798 780 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms