RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 IFNLR1Q8IU57 520 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 NUDCD3Q8IVD9 361 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 MYRIPQ8NFW9 859 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 SAAL1Q96ER3 474 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 HES6Q96HZ4 224 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 UNC45AQ9H3U1 944 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 SCOCQ9UIL1 159 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 DTNAQ9Y4J8 743 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 SSH2Q76I76 1423 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 CARMIL3Q8ND23 1372 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 CCDC188H7C350 402 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 MAPK13O15264 365 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 TLR2O60603 784 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 CELF2O95319 508 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 FAM107AO95990 144 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 PRKCBP05771 671 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 ITGA4P13612 1032 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 AP3M2P53677 418 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 KLHL38Q2WGJ6 581 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 FAM133BQ5BKY9 247 aaKnown RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 C6orf118Q5T5N4 469 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 TADA1Q96BN2 335 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 PITPNM3Q9BZ71 974 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 CPVLQ9H3G5 476 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 ECT2Q9H8V3 914 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 DMAP1Q9NPF5 467 aaPredicted RBP7.61□□□□□ -1.19
UPF2-203ENST00000397053 HDAC6Q9UBN7 1215 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 SLC25A13Q9UJS0 675 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 PKP3Q9Y446 797 aa7.61□□□□□ -1.19
UPF2-203ENST00000397053 NDUFB5O43674 189 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 GH1P01241 217 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 MYBP10242 640 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 MCF2P10911 925 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PCSK1P29120 753 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 ADCY2Q08462 1091 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 DMC1Q14565 340 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 BEND6Q5SZJ8 279 aaPredicted RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 ARHGAP18Q8N392 663 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SMARCAD1Q9H4L7 1026 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 NHEJ1Q9H9Q4 299 aaPredicted RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 CAPN10Q9HC96 672 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PDE11AQ9HCR9 933 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SNX24Q9Y343 169 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 UTYO14607 1347 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SYNGAP1Q96PV0 1343 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PRAMEF22A3QJZ6 481 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 FAM47DPA6NHR8 397 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 RASA4BC9J798 803 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 C2CD2LO14523 706 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 RASA4O43374 803 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SPAG7O75391 227 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 KRT8P05787 483 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 VAMP7P51809 220 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 AMPD2Q01433 879 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 UNC13DQ70J99 1090 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 LRRC8AQ8IWT6 810 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 NSUN7Q8NE18 718 aaKnown RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 JPH1Q9HDC5 661 aaPredicted RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 PKD2L2Q9NZM6 624 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 H2AFY2Q9P0M6 372 aaPredicted RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 ZFATQ9P243 1243 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 ARHGAP26Q9UNA1 814 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 IPPQ9Y573 584 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PCDHB6Q9Y5E3 794 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SYCP2Q9BX26 1530 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 TOP2BQ02880 1626 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 MLH3Q9UHC1 1453 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 A0A0G2JLW4 131 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 MAGEB2O15479 319 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 DYRK3O43781 588 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 RNASEH1O60930 286 aaKnown RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 CYP2C9P11712 490 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 RGS4P49798 205 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 NCALDP61601 193 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 RBP5P82980 135 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 QRICH1Q2TAL8 776 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PTRHD1Q6GMV3 140 aaKnown RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 LDHDQ86WU2 507 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SEPT1Q8WYJ6 367 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 LXNQ9BS40 222 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SLC38A7Q9NVC3 462 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 MAD2L2Q9UI95 211 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PCDHA13Q9Y5I0 950 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 ERBB3P21860 1342 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PCF11O94913 1555 aaKnown RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 TTLL13PA6NNM8 815 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 ZNF189O75820 626 aaPredicted RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 CYP2D6P10635 497 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 HARS2P49590 506 aaKnown RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 ROR1Q01973 937 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 PDAP1Q13442 181 aaKnown RBP7.6□□□□□ -1.19
UPF2-203ENST00000397053 MTMR2Q13614 643 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 KIZQ2M2Z5 673 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 CHSY1Q86X52 802 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 CATSPER3Q86XQ3 398 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SLC44A5Q8NCS7 719 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 SCFD2Q8WU76 684 aa7.6□□□□□ -1.19
UPF2-203ENST00000397053 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.6□□□□□ -1.19
UPF2-203ENST00000397053 PIH1D3Q9NQM4 214 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms