RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 NUP85Q9BW27 656 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 SORBS3O60504 671 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 PSMD6Q15008 389 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 EFL1Q7Z2Z2 1120 aaKnown RBP16.6■□□□□ 0.25
GNE-202ENST00000396594 EML4Q9HC35 981 aaKnown RBP16.6■□□□□ 0.25
GNE-202ENST00000396594 ERAP1Q9NZ08 941 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 NDUFB10O96000 172 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 MAPTP10636 758 aaKnown RBP16.59■□□□□ 0.25
GNE-202ENST00000396594 GARTP22102 1010 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 PAX3P23760 479 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
GNE-202ENST00000396594 ART3Q13508 389 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 PDCD2Q16342 344 aaPredicted RBP16.59■□□□□ 0.25
GNE-202ENST00000396594 LRIG3Q6UXM1 1119 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 FRA10AC1Q70Z53 315 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 RIBC1Q8N443 379 aaPredicted RBP16.59■□□□□ 0.25
GNE-202ENST00000396594 STKLD1Q8NE28 680 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 PIGOQ8TEQ8 1089 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 KCNB2Q92953 911 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 AAASQ9NRG9 546 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 APOL1O14791 398 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 PALMO75781 387 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 MDM2Q00987 491 aaPredicted RBP16.59■□□□□ 0.25
GNE-202ENST00000396594 ADSSL1Q8N142 457 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 SUCLA2Q9P2R7 463 aaPredicted RBP16.59■□□□□ 0.25
GNE-202ENST00000396594 APEX2Q9UBZ4 518 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 MYO1DO94832 1006 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 BCAR1P56945 870 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 SP110Q9HB58 689 aa16.59■□□□□ 0.25
GNE-202ENST00000396594 SRGNP10124 158 aa16.58■□□□□ 0.25
GNE-202ENST00000396594 SLC2A3P11169 496 aa16.58■□□□□ 0.25
GNE-202ENST00000396594 FBXL16Q8N461 479 aa16.58■□□□□ 0.25
GNE-202ENST00000396594 CENPKQ9BS16 269 aa16.58■□□□□ 0.25
GNE-202ENST00000396594 VIPAS39Q9H9C1 493 aa16.58■□□□□ 0.25
GNE-202ENST00000396594 TUBE1Q9UJT0 475 aa16.58■□□□□ 0.25
GNE-202ENST00000396594 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 A8MXQ7 604 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 GCLMP48507 274 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 ARHGDIAP52565 204 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 APPL2Q8NEU8 664 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 YY1AP1Q9H869 796 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 A0A1B0GTH6 734 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 HSPA4LO95757 839 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 ALDH1A1P00352 501 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 MARK3P27448 753 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 OAZ1P54368 228 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 COPS2P61201 443 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 NAA35Q5VZE5 725 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 TRIM67Q6ZTA4 783 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 TRMT10CQ7L0Y3 403 aaKnown RBP16.58■□□□□ 0.24
GNE-202ENST00000396594 CALML6Q8TD86 181 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 GMCL1Q96IK5 515 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 FOPNLQ96NB1 174 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 TMEM8AQ9HCN3 771 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 EXTL3O43909 919 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 STAG3L1P0CL83 205 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 CENPCQ03188 943 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 C2orf54Q08AI8 447 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 CASP8Q14790 479 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 RAET1EQ8TD07 263 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 KIF12Q96FN5 646 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 GDAP1L1Q96MZ0 367 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 PARD6BQ9BYG5 372 aa16.58■□□□□ 0.24
GNE-202ENST00000396594 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.24
GNE-202ENST00000396594 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.24
GNE-202ENST00000396594 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 ZNF18P17022 549 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 SRBD1Q8N5C6 995 aaKnown RBP16.57■□□□□ 0.24
GNE-202ENST00000396594 ATL2Q8NHH9 583 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 HPS3Q969F9 1004 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 PPLO60437 1756 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 ZNF197O14709 1029 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 NR3C2P08235 984 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 CYP4F22Q6NT55 531 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 RWDD4Q6NW29 188 aaKnown RBP16.57■□□□□ 0.24
GNE-202ENST00000396594 HSPH1Q92598 858 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 TAF1DQ9H5J8 278 aaPredicted RBP16.57■□□□□ 0.24
GNE-202ENST00000396594 PRDM16Q9HAZ2 1276 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 NVLO15381 856 aaKnown RBP16.57■□□□□ 0.24
GNE-202ENST00000396594 ICAM1P05362 532 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 TMEM132DQ14C87 1099 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 DGKDQ16760 1214 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 PPP1R9AQ9ULJ8 1098 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 CCDC22O60826 627 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 PDHBP11177 359 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 RASA1P20936 1047 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 TAF1CQ15572 869 aaPredicted RBP16.57■□□□□ 0.24
GNE-202ENST00000396594 EEPD1Q7L9B9 569 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 SCFD1Q8WVM8 642 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 ZDHHC15Q96MV8 337 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 DPP7Q9UHL4 492 aa16.57■□□□□ 0.24
GNE-202ENST00000396594 DPYDQ12882 1025 aa16.56■□□□□ 0.24
GNE-202ENST00000396594 SNX1Q13596 522 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms