RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 LAMP2P13473 410 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 MLH1P40692 756 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 TAS1R1Q7RTX1 841 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 HAS1Q92839 578 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 SHDQ96IW2 340 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 SLC2A4RGQ9NR83 387 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 RGL1Q9NZL6 768 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 DENND4AQ7Z401 1863 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 CFHP08603 1231 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 SCNN1GP51170 649 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 GRIK3Q13003 919 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 FUT10Q6P4F1 479 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 LILRA6Q6PI73 481 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 WASF1Q92558 559 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 ZNF707Q96C28 371 aaPredicted RBP19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 MYADMQ96S97 322 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 EIF2AQ9BY44 585 aaKnown RBP19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 ADAM28Q9UKQ2 775 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 SIT1Q9Y3P8 196 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 STK36Q9NRP7 1315 aa19.46■□□□□ 0.71
EXOSC3-202ENST00000396521 WDR87Q6ZQQ6 2873 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 ZNF292O60281 2723 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 KRBA1A5PL33 1030 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 ANHXE9PGG2 379 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 TGM5O43548 720 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 NARSO43776 548 aaKnown RBP19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 RFPL2O75678 378 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 SLITRK3O94933 977 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 PDXDC1Q6P996 788 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 SLC27A1Q6PCB7 646 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 SKAP1Q86WV1 359 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 TPH2Q8IWU9 490 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 FEZF2Q8TBJ5 459 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 KCNG4Q8TDN1 519 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 DYDC2Q96IM9 177 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 TBC1D17Q9HA65 648 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 PCDHA12Q9UN75 941 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 KCNJ14Q9UNX9 436 aa19.45■□□□□ 0.7
EXOSC3-202ENST00000396521 CACNA1AO00555 2505 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 A0A1B0GUA9 196 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 TADA2AO75478 443 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 ZMYND10O75800 440 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 HNRNPA1P09651 372 aaKnown RBP eCLIP19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 MBTD1Q05BQ5 628 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 SPIRE1Q08AE8 756 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 NCAPH2Q6IBW4 605 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 PIK3AP1Q6ZUJ8 805 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 RTL10Q7L3V2 364 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 PALB2Q86YC2 1186 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 RSAD2Q8WXG1 361 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 PRIMPOLQ96LW4 560 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 ZFP42Q96MM3 310 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 CCDC43Q96MW1 224 aaKnown RBP19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 AIFM3Q96NN9 605 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 HSD17B14Q9BPX1 270 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 ARHGEF3Q9NR81 526 aa19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 SF3B1O75533 1304 aaKnown RBP eCLIP19.44■□□□□ 0.7
EXOSC3-202ENST00000396521 ARF4P18085 180 aaPredicted RBP19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 ARL2P36404 184 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 CYP4A11Q02928 519 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 ELAVL2Q12926 359 aaKnown RBP19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 CTTNQ14247 550 aaKnown RBP19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 AMHR2Q16671 573 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 GPR152Q8TDT2 470 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 RIN2Q8WYP3 895 aaPredicted RBP19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 CPB2Q96IY4 423 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 GPR62Q9BZJ7 368 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 XPNPEP1Q9NQW7 623 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 BMP2KQ9NSY1 1161 aaPredicted RBP19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 PDRG1Q9NUG6 133 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 MIOSQ9NXC5 875 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 CA14Q9ULX7 337 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 HES2Q9Y543 173 aa19.43■□□□□ 0.7
EXOSC3-202ENST00000396521 HOXA9P31269 272 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 STK3Q13188 491 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 HTR4Q13639 388 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 CAPSQ13938 189 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 LIN9Q5TKA1 542 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 DCLRE1AQ6PJP8 1040 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 MTSS1LQ765P7 747 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 C1orf210Q8IVY1 113 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 GSTCDQ8NEC7 633 aa19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 EIF2AK1Q9BQI3 630 aaKnown RBP19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 NXF3Q9H4D5 531 aaKnown RBP19.42■□□□□ 0.7
EXOSC3-202ENST00000396521 ZBTB39O15060 712 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 SPATA31D3P0C874 917 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 FSHRP23945 695 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 STARD6P59095 220 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 HSP90AA2PQ14568 343 aaPredicted RBP19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 SPATA31D4Q6ZUB0 917 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 GET4Q7L5D6 327 aaPredicted RBP19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 PIK3R5Q8WYR1 880 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 TTPALQ9BTX7 342 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 APOL6Q9BWW8 343 aa19.41■□□□□ 0.7
EXOSC3-202ENST00000396521 CDH7Q9ULB5 785 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms