RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CETN1Q12798 172 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 NR1I3Q14994 352 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 SNX17Q15036 470 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 DCAF4L1Q3SXM0 396 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 SPECC1LQ69YQ0 1117 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 APTXQ7Z2E3 356 aaKnown RBP16.78■□□□□ 0.28
VAMP1-202ENST00000396308 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 VSTM4Q8IW00 320 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 IQCDQ96DY2 449 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 TMEM106CQ9BVX2 250 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.78■□□□□ 0.28
VAMP1-202ENST00000396308 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
VAMP1-202ENST00000396308 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 ITIH6Q6UXX5 1313 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 A0A1W2PQC6 194 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 NRDCO43847 1150 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 TSPAN1O60635 241 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 CTSHP09668 335 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 MCF2P10911 925 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 ADSSP30520 456 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 GSDMDP57764 484 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 SURF1Q15526 300 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 FNBP1Q96RU3 617 aa16.77■□□□□ 0.28
VAMP1-202ENST00000396308 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.28
VAMP1-202ENST00000396308 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
VAMP1-202ENST00000396308 B4GALT5O43286 388 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 CYP24A1Q07973 514 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 KCNH2Q12809 1159 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 BFSP2Q13515 415 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 MIIPQ5JXC2 388 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 SLC27A1Q6PCB7 646 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 CBWD2Q8IUF1 395 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 CAGE1Q8TC20 777 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 NUP58Q9BVL2 599 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 TRIM6Q9C030 488 aaPredicted RBP16.76■□□□□ 0.27
VAMP1-202ENST00000396308 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 AGPAT5Q9NUQ2 364 aa16.76■□□□□ 0.27
VAMP1-202ENST00000396308 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
VAMP1-202ENST00000396308 TNRC18O15417 2968 aaPredicted RBP16.76■□□□□ 0.27
VAMP1-202ENST00000396308 CITO14578 2027 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 GPR182O15218 404 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 B4GALT4O60513 344 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 CSDE1O75534 798 aaKnown RBP16.75■□□□□ 0.27
VAMP1-202ENST00000396308 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 ARF4P18085 180 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-202ENST00000396308 PROZP22891 400 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 MYL7Q01449 175 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 AMHR2Q16671 573 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 HACE1Q8IYU2 909 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 USP38Q8NB14 1042 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 CCDC150Q8NCX0 1101 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 CPB2Q96IY4 423 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 ZBTB45Q96K62 511 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-202ENST00000396308 ERGIC2Q96RQ1 377 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 SENP6Q9GZR1 1112 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-202ENST00000396308 CDT1Q9H211 546 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 TANC1Q9C0D5 1861 aa16.75■□□□□ 0.27
VAMP1-202ENST00000396308 TEX33O43247 280 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 IL18RAPO95256 599 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 EDN1P05305 212 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 ADRB2P07550 413 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 TRIM21P19474 475 aaKnown RBP16.74■□□□□ 0.27
VAMP1-202ENST00000396308 GJA8P48165 433 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 ACOT2P49753 483 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 PAK2Q13177 524 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 PSMD6Q15008 389 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 SYCP1Q15431 976 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 NEK11Q8NG66 645 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 CCDC127Q96BQ5 260 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 MFSD14AQ96MC6 490 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
VAMP1-202ENST00000396308 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 MMRN2Q9H8L6 949 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 RPF1Q9H9Y2 349 aaKnown RBP16.74■□□□□ 0.27
VAMP1-202ENST00000396308 USP20Q9Y2K6 914 aa16.74■□□□□ 0.27
VAMP1-202ENST00000396308 ANK1P16157 1881 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
VAMP1-202ENST00000396308 DCDC2CA8MYV0 355 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 P4HA2O15460 535 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 CLTAP09496 248 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 IQCF3P0C7M6 154 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
VAMP1-202ENST00000396308 FGFR4P22455 802 aa16.73■□□□□ 0.27
VAMP1-202ENST00000396308 GTF2H1P32780 548 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms