RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GRAMD1CQ8IYS0 662 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TC2NQ8N9U0 490 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TUT1Q9H6E5 874 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CNOT10Q9H9A5 744 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CYP39A1Q9NYL5 469 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PCDHA13Q9Y5I0 950 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 A6NJR5 290 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RARBP10826 455 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 EIF4A3P38919 411 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PRKCIP41743 596 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RBP5P82980 135 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 EHHADHQ08426 723 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DCAF4L1Q3SXM0 396 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM119Q4V9L6 283 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CDKL2Q92772 493 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DYDC2Q96IM9 177 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 FAM204AQ9H8W3 233 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CYP3A43Q9HB55 503 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CACNA1CQ13936 2221 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GOLGA8CPA6NN73 597 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 FAM86B1E9PN63 330 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 FAM86B2P0C5J1 330 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CAPN2P17655 700 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DNA2P51530 1060 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PLPPR4Q7Z2D5 763 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RNF180Q86T96 592 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CCDC114Q96M63 670 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 UBE2TQ9NPD8 197 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 STK39Q9UEW8 545 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SLC37A4O43826 429 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SLITRK3O94933 977 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 OATP04181 439 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 MYCNP04198 464 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HARSP12081 509 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HSD17B4P51659 736 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 MAPK8IP2Q13387 824 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 WDR93Q6P2C0 686 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GLTPD2A6NH11 291 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RTN2O75298 545 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CTTNQ14247 550 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 NOL9Q5SY16 702 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 METTL23Q86XA0 190 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF653Q96CK0 615 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 FAM193BQ96PV7 902 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SENP2Q9HC62 589 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SPTBN2O15020 2390 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ACADSBP45954 432 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ACAP1Q15027 740 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 WDR72Q3MJ13 1102 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RSAD2Q8WXG1 361 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TBC1D31Q96DN5 1066 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DDX56Q9NY93 547 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HSPBP1Q9NZL4 362 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 F8W8V4 182 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PMM2O15305 246 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DAPK3O43293 454 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HIP1RO75146 1068 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 CTNNA1P35221 906 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 HUNKP57058 714 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 TWF2Q6IBS0 349 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SCFD1Q8WVM8 642 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.62□□□□□ -1.831e-6■■□□□ 14
VPS13C-203ENST00000395896 DESI2Q9BSY9 194 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DNAJC12Q9UKB3 198 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 EMSYQ7Z589 1322 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SPAG17Q6Q759 2223 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ACKR2O00590 384 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GTF2BQ00403 316 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ERCC6LQ2NKX8 1250 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ARRDC4Q8NCT1 418 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ACER1Q8TDN7 264 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ACAP3Q96P50 834 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 NACA2Q9H009 215 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 RRN3Q9NYV6 651 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SNX12Q9UMY4 172 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SSX2IPQ9Y2D8 614 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PCDHB4Q9Y5E5 795 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 EP300Q09472 2414 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ARL4AP40617 200 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF131P52739 623 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 DRAP1Q14919 205 aaPredicted RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 NYAP1Q6ZVC0 841 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 THEM5Q8N1Q8 247 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 C1orf131Q8NDD1 294 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 U2AF1L4Q8WU68 220 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 EXOC4Q96A65 974 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 PGBD4Q96DM1 585 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 C18orf8Q96DM3 657 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 MTIF3Q9H2K0 278 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 A1CFQ9NQ94 594 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 SAMD15Q9P1V8 674 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 IPO11Q9UI26 975 aaKnown RBP3.62□□□□□ -1.83
VPS13C-203ENST00000395896 COL1A2P08123 1366 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GOLGA8QA0A0J9YX86 632 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GOLGA8OA6NCC3 632 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 GOLGA8NF8WBI6 632 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ADCY3O60266 1144 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 ERCC3P19447 782 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 INPP5BP32019 993 aa3.62□□□□□ -1.83
VPS13C-203ENST00000395896 EMC2Q15006 297 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms