RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 TLR10Q9BXR5 811 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 MYH7BA7E2Y1 1941 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 KCNJ1P48048 391 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 TRADDQ15628 312 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 EFCAB12Q6NXP0 572 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 TXNRD2Q9NNW7 524 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 RSPH14Q9UHP6 348 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 HGSO14964 777 aaPredicted RBP17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 ATP2C2O75185 946 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 MBOAT7Q96N66 472 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 NUP85Q9BW27 656 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 GANQ9H2C0 597 aa17.1■□□□□ 0.33
SMARCD1-202ENST00000394963 MYO1FO00160 1098 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 SLC16A3O15427 465 aaKnown RBP17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 ITGA4P13612 1032 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 NAB2Q15742 525 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 FIGNQ5HY92 759 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 UBL4BQ8N7F7 174 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 ASAP3Q8TDY4 903 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 TBC1D8O95759 1140 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 HP1BP3Q5SSJ5 553 aaPredicted RBP17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 ATP8A1Q9Y2Q0 1164 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 SNX24Q9Y343 169 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 PGRMC1O00264 195 aaKnown RBP17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 HLA-DRAP01903 254 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 H2AFXP16104 143 aaPredicted RBP17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 YBX3P16989 372 aaKnown RBP eCLIP17.09■□□□□ 0.334e-12■■■□□ 16
SMARCD1-202ENST00000394963 CEP85LQ5SZL2 805 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 TRIM51Q9BSJ1 452 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 MTMR12Q9C0I1 747 aa17.09■□□□□ 0.33
SMARCD1-202ENST00000394963 MAPK7Q13164 816 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 GLRA4Q5JXX5 417 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 SYCE1Q8N0S2 351 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 NOC2LQ9Y3T9 749 aaKnown RBP17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.33
SMARCD1-202ENST00000394963 SBF2Q86WG5 1849 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 KIF4AO95239 1232 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 FDX1P10109 184 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 MYBL2P10244 700 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 SLCO1A2P46721 670 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 MMP14P50281 582 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 SCYL2Q6P3W7 929 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 IRF2BP2Q7Z5L9 587 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.08■□□□□ 0.327e-24■■■■■ 30.5
SMARCD1-202ENST00000394963 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 CPB2Q96IY4 423 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 ADAM33Q9BZ11 813 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 STIM2Q9P246 746 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 TNFSF9P41273 254 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 PLA2G4AP47712 749 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 OR2W6PQ8NHA6 318 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 SEMA4DQ92854 862 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
SMARCD1-202ENST00000394963 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 GOLGA6CA6NDK9 693 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 PRKCBP05771 671 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 GOLGA6DP0CG33 693 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 GGCXP38435 758 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 ADCYAP1R1P41586 468 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 HUNKP57058 714 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 CCNA1P78396 465 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 RRAGCQ9HB90 399 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 ANKEF1Q9NU02 776 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 GOLGA6AQ9NYA3 693 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 CEP350Q5VT06 3117 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 ANO9A1A5B4 782 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 CDO1Q16878 200 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 SYCP2LQ5T4T6 812 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 RSRC2Q7L4I2 434 aaKnown RBP17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 CCDC26Q8TAB7 109 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 C1orf54Q8WWF1 131 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 CEP83Q9Y592 693 aa17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
SMARCD1-202ENST00000394963 TTI1O43156 1089 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms