RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 A6NHS1 94 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 MAP3K13O43283 966 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 SPOPO43791 374 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 UNC5CO95185 931 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 ECEL1O95672 775 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 RPA1P27694 616 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 CALRP27797 417 aaKnown RBP17.6■□□□□ 0.41
CNP-201ENST00000393888 RAD23BP54727 409 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 KRT17Q04695 432 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 SIX1Q15475 284 aaPredicted RBP17.6■□□□□ 0.41
CNP-201ENST00000393888 PPP1R18Q6NYC8 613 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 VSIG1Q86XK7 387 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 ETNPPLQ8TBG4 499 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 SERPINB12Q96P63 405 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 FRMPD4Q14CM0 1322 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 MIF4GDA9UHW6 222 aaKnown RBP17.6■□□□□ 0.41
CNP-201ENST00000393888 AP1G2O75843 785 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 CCNB1P14635 433 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 GM2AP17900 193 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 ATP4AP20648 1035 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 MYL7Q01449 175 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 BMT2Q1RMZ1 405 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 QRICH1Q2TAL8 776 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 TRMT10CQ7L0Y3 403 aaKnown RBP17.6■□□□□ 0.41
CNP-201ENST00000393888 ARHGEF19Q8IW93 802 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 SLFN12Q8IYM2 578 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 ERMNQ8TAM6 284 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 ERP27Q96DN0 273 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 LBHD1Q9BQE6 289 aaPredicted RBP17.6■□□□□ 0.41
CNP-201ENST00000393888 PITPNM3Q9BZ71 974 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 MTUS1Q9ULD2 1270 aa17.6■□□□□ 0.41
CNP-201ENST00000393888 FAM86B1E9PN63 330 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 EML1O00423 815 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 TTLL1O95922 423 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 FAM86B2P0C5J1 330 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 GBP1P32455 592 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 CTCFP49711 727 aaPredicted RBP17.59■□□□□ 0.41
CNP-201ENST00000393888 GPC5P78333 572 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 DLG4P78352 724 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 ARHGAP4P98171 946 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 ZNF568Q3ZCX4 644 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 RBM26Q5T8P6 1007 aaKnown RBP17.59■□□□□ 0.41
CNP-201ENST00000393888 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
CNP-201ENST00000393888 KAT5Q92993 513 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 THAP12O43422 761 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 SPAG7O75391 227 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 FAM13AO94988 1023 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 HSPA6P17066 643 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 TAC1P20366 129 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 PCK1P35558 622 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 GNPTABQ3T906 1256 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 ANO7Q6IWH7 933 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 C11orf63Q6NUN7 778 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 ZNF449Q6P9G9 518 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 INTS8Q75QN2 995 aaKnown RBP17.59■□□□□ 0.41
CNP-201ENST00000393888 CYFIP1Q7L576 1253 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 FAM118BQ9BPY3 351 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
CNP-201ENST00000393888 ONECUT3O60422 494 aaPredicted RBP17.58■□□□□ 0.41
CNP-201ENST00000393888 GNAZP19086 355 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 MTFR1Q15390 333 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 CLUL1Q15846 466 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 RINT1Q6NUQ1 792 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 TTC8Q8TAM2 541 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 CHST7Q9NS84 486 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 NAALADL1Q9UQQ1 740 aa17.58■□□□□ 0.41
CNP-201ENST00000393888 NHSQ6T4R5 1651 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 CHMP2AO43633 222 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 SGPL1O95470 568 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 ITGA8P53708 1063 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 DNAJC3Q13217 504 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 KIF22Q14807 665 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 FBF1Q8TES7 1133 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 MAGEB18Q96M61 343 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 ADAM33Q9BZ11 813 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 SLCO1B3Q9NPD5 702 aa17.58■□□□□ 0.4
CNP-201ENST00000393888 PEX11AO75192 247 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 TTC4O95801 387 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
CNP-201ENST00000393888 USH1GQ495M9 461 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 RNF43Q68DV7 783 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 TPH2Q8IWU9 490 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 RNF217Q8TC41 542 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 C9orf72Q96LT7 481 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 RAB3IPQ96QF0 476 aaPredicted RBP17.57■□□□□ 0.4
CNP-201ENST00000393888 SH3GL3Q99963 347 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 EIF2AK1Q9BQI3 630 aaKnown RBP17.57■□□□□ 0.4
CNP-201ENST00000393888 KIAA1683Q9H0B3 1180 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 NKIRAS1Q9NYS0 192 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 FRMD4BQ9Y2L6 1034 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 THSD7AQ9UPZ6 1657 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 MEIS2O14770 477 aa17.57■□□□□ 0.4
CNP-201ENST00000393888 LUC7L3O95232 432 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms