RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CNNM4Q6P4Q7 775 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 ZPBP2Q6X784 338 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 ZNF720Q7Z2F6 126 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 GDPD5Q8WTR4 605 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 BICD1Q96G01 975 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 FIZ1Q96SL8 496 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 C11orf84Q9BUA3 381 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 ST6GALNAC4Q9H4F1 302 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 MRPL44Q9H9J2 332 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 FRMD3A2A2Y4 597 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 NDUFA8P51970 172 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 ASIC1P78348 528 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 CSPP1Q1MSJ5 1256 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 ZNF568Q3ZCX4 644 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 P2RX5Q93086 422 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 PTPRHQ9HD43 1115 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 OLFML3Q9NRN5 406 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 SNTG2Q9NY99 539 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 HCSTQ9UBK5 93 aa20.83■□□□□ 0.93
PDLIM7-204ENST00000393546 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 ACTN4O43707 911 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 TOM1L1O75674 476 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 MCF2P10911 925 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 POU3F3P20264 500 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 PROZP22891 400 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 ZC2HC1CQ53FD0 456 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 MPZL3Q6UWV2 235 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 ZBTB33Q86T24 672 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 HVCN1Q96D96 273 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 ZNF558Q96NG5 402 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 FAM193BQ96PV7 902 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 GAD1Q99259 594 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 TBC1D13Q9NVG8 400 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 LMCD1Q9NZU5 365 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 TBC1D7Q9P0N9 293 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 PCDHB13Q9Y5F0 798 aa20.82■□□□□ 0.92
PDLIM7-204ENST00000393546 CHD7Q9P2D1 2997 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 CARNS1A5YM72 827 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 INPPL1O15357 1258 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 CLDN3O15551 220 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 LPXNO60711 386 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 POMCP01189 267 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 MLH1P40692 756 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 MATR3P43243 847 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 ALDH7A1P49419 539 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 LIG4P49917 911 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 PTPROQ16827 1216 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 KCNT2Q6UVM3 1135 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 KLHL23Q8NBE8 558 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 PAGE5Q96GU1 130 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 ZBTB45Q96K62 511 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 CDT1Q9H211 546 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 BLZF1Q9H2G9 400 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 TSHZ2Q9NRE2 1034 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 KLK14Q9P0G3 267 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 PLAGL2Q9UPG8 496 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 GDAQ9Y2T3 454 aa20.81■□□□□ 0.92
PDLIM7-204ENST00000393546 HNRNPDLO14979 420 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 GCNT3O95395 438 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 PIGRP01833 764 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 AFF1P51825 1210 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 BCAR1P56945 870 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 COASYQ13057 564 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 ALCAMQ13740 583 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 UNC13DQ70J99 1090 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 MAP4K3Q8IVH8 894 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 THNSL1Q8IYQ7 743 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 ZFP42Q96MM3 310 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 RPS6KC1Q96S38 1066 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 CCDC94Q9BW85 323 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 GBP3Q9H0R5 595 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 GOLPH3LQ9H4A5 285 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 NRDE2Q9H7Z3 1164 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 MIOSQ9NXC5 875 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 ANKFY1Q9P2R3 1169 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 MTCH2Q9Y6C9 303 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 ZMYM2Q9UBW7 1377 aa20.8■□□□□ 0.92
PDLIM7-204ENST00000393546 KIAA1671Q9BY89 1806 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 PVALEFA0A1B0GWK0 134 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 ABLIM1O14639 778 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 ZC3H11AO75152 810 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 RECQL4O94761 1208 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 ZNF202O95125 648 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 HARSP12081 509 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 CASP1P29466 404 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 PPM1AP35813 382 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 GRM5P41594 1212 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 SCNN1GP51170 649 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 YARSP54577 528 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 MCL1Q07820 350 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 CUL4BQ13620 913 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 NOLC1Q14978 699 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 STXBP4Q6ZWJ1 553 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 ZNF280BQ86YH2 543 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 GRAMD1CQ8IYS0 662 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 CCDC34Q96HJ3 373 aa20.79■□□□□ 0.92
PDLIM7-204ENST00000393546 ACCSQ96QU6 501 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms