RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 IGFLR1Q9H665 355 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 LMCD1Q9NZU5 365 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 ARHGAP28Q9P2N2 729 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 THEGQ9P2T0 379 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 CCDC39Q9UFE4 941 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 GDAQ9Y2T3 454 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 PRG3Q9Y2Y8 225 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 RALGAPA2Q2PPJ7 1873 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 HIDE1A8MVS5 230 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 K7ENM7 598 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 PER2O15055 1255 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 PPP6R2O75170 966 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 TBCAO75347 108 aaKnown RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 RECQL4O94761 1208 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 GALTP07902 379 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 NMT1P30419 496 aaKnown RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 CA8P35219 290 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 DDIT3P35638 169 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 STAT6P42226 847 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ME1P48163 572 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 NUBP1P53384 320 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 BECN1Q14457 450 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 CLUL1Q15846 466 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZNF568Q3ZCX4 644 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 SEZ6Q53EL9 994 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 GLRA4Q5JXX5 417 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 TMEM130Q8N3G9 435 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 CNNM3Q8NE01 707 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 GSTCDQ8NEC7 633 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 MICAL1Q8TDZ2 1067 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 MRPS27Q92552 414 aaKnown RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 DHX58Q96C10 678 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 TCF25Q9BQ70 676 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 TIPINQ9BVW5 301 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 VN1R3Q9BXE9 311 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 MRPL4Q9BYD3 311 aaKnown RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 LMAN2LQ9H0V9 348 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 CDT1Q9H211 546 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ENTPD7Q9NQZ7 604 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 TLR9Q9NR96 1032 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 MARCH5Q9NX47 278 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 SPG21Q9NZD8 308 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCND2Q9NZV8 630 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 TBC1D7Q9P0N9 293 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ANKFY1Q9P2R3 1169 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ODF2LQ9ULJ1 636 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 MORC2Q9Y6X9 1032 aaPredicted RBP8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 PLXNA4Q9HCM2 1894 aa8.43□□□□□ -1.06
HMGB3P1-201ENST00000393368 ATG2AQ2TAZ0 1938 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 MYH15Q9Y2K3 1946 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 TISP43B9A030 160 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 H3BQ06 376 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 ABLIM1O14639 778 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 PTGESO14684 152 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 MEFVO15553 781 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 GALR2O43603 387 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 TRAK2O60296 914 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 CUTAO60888 179 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCNA5P22460 613 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 IGFBP6P24592 240 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 CASP1P29466 404 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 OR1G1P47890 313 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 NRIP1P48552 1158 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 ALDH7A1P49419 539 aaKnown RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZNF131P52739 623 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 NCKAP1LP55160 1127 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 DLX2Q07687 328 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 STRN3Q13033 797 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 E2F4Q16254 413 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 DCAF4L1Q3SXM0 396 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZC2HC1CQ53FD0 456 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 CCDC73Q6ZRK6 1079 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 SV2BQ7L1I2 683 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 HAUS6Q7Z4H7 955 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 SFR1Q86XK3 245 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCNG4Q8TDN1 519 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 LEO1Q8WVC0 666 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 DDX12PQ92771 950 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 HLA-CQ95604 372 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 HPS3Q969F9 1004 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 BICD1Q96G01 975 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 IGSF21Q96ID5 467 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 B3GALT6Q96L58 329 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 NECAB3Q96P71 396 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 FAM193BQ96PV7 902 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 FIZ1Q96SL8 496 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 PAAF1Q9BRP4 392 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 ADPGKQ9BRR6 497 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 FGFBP2Q9BYJ0 223 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 HAPLN2Q9GZV7 340 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 TMEM134Q9H6X4 195 aa8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 UBE2ZQ9H832 354 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P1-201ENST00000393368 C17orf75Q9HAS0 396 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms