RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TACC3Q9Y6A5 838 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 TSPAN4O14817 238 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TUSC2O75896 110 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RGS9O75916 674 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 PCDH8O95206 1070 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ADAMTS2O95450 1211 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ADKP55263 362 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 UBASH3AP57075 661 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PCBP4P57723 403 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 KCNB1Q14721 858 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 EPHX4Q8IUS5 362 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RNF168Q8IYW5 571 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 RNF125Q96EQ8 232 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CITED2Q99967 270 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 NKX2-4Q9H2Z4 354 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ZMAT3Q9HA38 289 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 PPARGC1AQ9UBK2 798 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 SUFUQ9UMX1 484 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RUVBL1Q9Y265 456 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 COA3Q9Y2R0 106 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 BACE2Q9Y5Z0 518 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 SNAP23O00161 211 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PEX12O00623 359 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 C2CD2LO14523 706 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TNFRSF10CO14798 259 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 AXIN1O15169 862 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PRAMEF4O60810 478 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PRKCHP24723 683 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ATP5DP30049 168 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 HOXC13P31276 330 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 VEGFBP49765 207 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RARSP54136 660 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 ZNF543Q08ER8 600 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PTK2BQ14289 1009 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 VWA3BQ502W6 1294 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 KLHL7Q8IXQ5 586 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 EXOC4Q96A65 974 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 THUMPD3Q9BV44 507 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 GIMAP2Q9UG22 337 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 DAGLAQ9Y4D2 1042 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 B4E171 279 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PHGDHO43175 533 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 KERAO60938 352 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ACADMP11310 421 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 LCP1P13796 627 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PDIA3P30101 505 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 TSPAN7P41732 249 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PDCD1Q15116 288 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 MEA1Q16626 185 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 MMEL1Q495T6 779 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CDCP2Q5VXM1 449 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ISLR2Q6UXK2 745 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 PCDH19Q8TAB3 1148 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 BRIX1Q8TDN6 353 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 TMX3Q96JJ7 454 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 C16orf45Q96MC5 204 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 PRAM1Q96QH2 718 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 EIF3CQ99613 913 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 MAGEB5Q9BZ81 275 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 BHLHE41Q9C0J9 482 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 SLC25A18Q9H1K4 315 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 EPC1Q9H2F5 836 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CGNQ9P2M7 1197 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 CORO1CQ9ULV4 474 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 EMC9Q9Y3B6 208 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RB1CC1Q8TDY2 1594 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RNF223E7ERA6 249 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RAB27BO00194 218 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 BCAT1P54687 386 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 SPIRE1Q08AE8 756 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 NTRK3Q16288 839 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 FAM180AQ6UWF9 173 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CEP68Q76N32 757 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ZNF765Q7L2R6 523 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TMEM57Q8N5G2 664 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 GSTCDQ8NEC7 633 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 NOC3LQ8WTT2 800 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 ATXN2LQ8WWM7 1075 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 DDX17Q92841 729 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 ATP6V0A1Q93050 837 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ABHD17AQ96GS6 310 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CTAGE1Q96RT6 745 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TMEM60Q9H2L4 133 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 GPATCH2Q9NW75 528 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 HPF1Q9NWY4 346 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 SRRDQ9UH36 339 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 CPSF3Q9UKF6 684 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 CNPY2Q9Y2B0 182 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 KLHL20Q9Y2M5 609 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 SMARCA2P51531 1590 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 DGKIO75912 1065 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 B3GALT4O96024 378 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 HLA-DPA1P20036 260 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 POU3F2P20265 443 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 ZNF445P59923 1031 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 KRT72Q14CN4 511 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TBCEQ15813 527 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 TRIM61Q5EBN2 209 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TMEM201Q5SNT2 666 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms