RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 ZSCAN18Q8TBC5 510 aaPredicted RBP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 LEO1Q8WVC0 666 aaPredicted RBP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 TEKT4Q8WW24 435 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 APPBP2Q92624 585 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 TAF4BQ92750 862 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 OPTNQ96CV9 577 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 CRAMP1Q96RY5 1269 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 TCF12Q99081 682 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 SEC62Q99442 399 aaKnown RBP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 EYA3Q99504 573 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 DSCC1Q9BVC3 393 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 OSBPL10Q9BXB5 764 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 EIF2AQ9BY44 585 aaKnown RBP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 FUT8Q9BYC5 575 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 PARD6BQ9BYG5 372 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 IL25Q9H293 177 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 ATXN3LQ9H3M9 355 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF576Q9H609 170 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC86Q9H6F5 360 aaKnown RBP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 FAM204AQ9H8W3 233 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 VIPAS39Q9H9C1 493 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 AATFQ9NY61 560 aaKnown RBP eCLIP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 CRIM1Q9NZV1 1036 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 HMG20BQ9P0W2 317 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 LRP2BPQ9P2M1 347 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 IMPACTQ9P2X3 320 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 ATXN10Q9UBB4 475 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 SEL1LQ9UBV2 794 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 PARP2Q9UGN5 583 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 CROTQ9UKG9 612 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 VAV3Q9UKW4 847 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 PALD1Q9ULE6 856 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 CARD8Q9Y2G2 431 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 SUGT1Q9Y2Z0 365 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 PCDHGC5Q9Y5F6 944 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 RBM8AQ9Y5S9 174 aaKnown RBP2.87□□□□□ -1.95
TRAV41-201ENST00000390468 PLXNA1Q9UIW2 1896 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 MAST3O60307 1309 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF532Q9HCE3 1301 aa2.87□□□□□ -1.95
TRAV41-201ENST00000390468 DOCK5Q9H7D0 1870 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 TMEM265A0A087WTH1 108 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 DYTNA2CJ06 578 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PABPN1LA6NDY0 278 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF503-AS2A6NEH8 195 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 B4DLN1 442 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GOLGA8KD6RF30 607 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 STXBP3O00186 592 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NDUFAB1O14561 156 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MAP2K7O14733 419 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 BIRC5O15392 142 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GPAA1O43292 621 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PRC1O43663 620 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CYTH3O43739 400 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SORBS3O60504 671 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GADD45BO75293 160 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 TADA3O75528 432 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SKAP2O75563 359 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 STAM2O75886 525 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 FLOT1O75955 427 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 RNF8O76064 485 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 URI1O94763 535 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SEC31AO94979 1220 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 B3GALT4O96024 378 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SRGNP10124 158 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 HSPD1P10809 573 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NAT2P11245 290 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ALOX15P16050 662 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PDE6AP16499 860 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GNAT2P19087 354 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SFPQP23246 707 aaKnown RBP eCLIP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 KLRK1P26718 216 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PSMA5P28066 241 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MLH1P40692 756 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PSMC4P43686 418 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 FNTAP49354 379 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CTCFP49711 727 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NEK4P51957 841 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 HDAC4P56524 1084 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GPSM2P81274 684 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MRPS35P82673 323 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PTH1RQ03431 593 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ZP2Q05996 745 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PPP2R3AQ06190 1150 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ACTN3Q08043 901 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NSUN2Q08J23 767 aaKnown RBP eCLIP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MESP2Q0VG99 397 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 IKQ13123 557 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PPFIA1Q13136 1202 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MRPL58Q14197 206 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 KRT32Q14532 448 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 DSC3Q14574 896 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SEPT2Q15019 361 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 UBE3CQ15386 1083 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 IMMTQ16891 758 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 RNF187Q5TA31 235 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 THEMIS2Q5TEJ8 643 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CREB3L3Q68CJ9 461 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ALG1LQ6GMV1 187 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms