RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MTFR1LQ9H019 292 aa0.31□□□□□ -2.36
RNU6-540P-201ENST00000384622 EHMT1Q9H9B1 1298 aa0.31□□□□□ -2.36
RNU6-540P-201ENST00000384622 SPON1Q9HCB6 807 aa0.31□□□□□ -2.36
RNU6-540P-201ENST00000384622 ST3GAL5Q9UNP4 418 aa0.31□□□□□ -2.36
RNU6-540P-201ENST00000384622 DSTQ03001 7570 aaKnown RBP0.31□□□□□ -2.36
RNU6-540P-201ENST00000384622 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 PRR5-ARHGAP8B1AHC4 643 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 TISP43B9A030 160 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 SP1P08047 785 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 ELFN1P0C7U0 828 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 CDC25AP30304 524 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 EPHA5P54756 1037 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 KCNAB2Q13303 367 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 BFSP2Q13515 415 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 KEAP1Q14145 624 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 SNAP47Q5SQN1 464 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 PRAMEF17Q5VTA0 474 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 KCTD1Q719H9 257 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 OTOP3Q7RTS5 596 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 BCL6BQ8N143 479 aaPredicted RBP0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 PLA2G15Q8NCC3 412 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 LSM14BQ9BX40 385 aaKnown RBP0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 RBCK1Q9BYM8 510 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 MRPL44Q9H9J2 332 aaKnown RBP0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 SERGEFQ9UGK8 458 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 DENND2AQ9ULE3 1009 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 CLCA2Q9UQC9 943 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 NTNG1Q9Y2I2 539 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 SUGT1Q9Y2Z0 365 aa0.3□□□□□ -2.36
RNU6-540P-201ENST00000384622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 IGKV3D-15A0A087WSY6 115 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 MEIS3P2A8K0S8 358 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 PRRT4C9JH25 899 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 KCNH1O95259 989 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 RBP3P10745 1247 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 MYF6P23409 242 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 GZMKP49863 264 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 FAM160A1Q05DH4 1040 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 CCDC6Q16204 474 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 C14orf177Q52M58 125 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 MIS18BP1Q6P0N0 1132 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 LRSAM1Q6UWE0 723 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 FAM198BQ6UWH4 519 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 C15orf39Q6ZRI6 1047 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 COLCA1Q6ZS62 124 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 GK5Q6ZS86 529 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 THNSL2Q86YJ6 484 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 TMEM132CQ8N3T6 1108 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 LNX2Q8N448 690 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 NPLOC4Q8TAT6 608 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 IGFBPL1Q8WX77 278 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 ATP2A3Q93084 1043 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 RCC1LQ96I51 464 aaKnown RBP0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 FGD4Q96M96 766 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 INPP4AQ96PE3 977 aaPredicted RBP0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 HAUS7Q99871 368 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 PDGFCQ9NRA1 345 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 SAE1Q9UBE0 346 aaPredicted RBP0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 DSEQ9UL01 958 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
RNU6-540P-201ENST00000384622 FBN3Q75N90 2809 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 TTC3P53804 2025 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 TMEM129A0AVI4 362 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 A8MU10 97 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 GCOM1H8Y6P7 765 aaPredicted RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 ARNTLO00327 626 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 YY2O15391 372 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 MEFVO15553 781 aaPredicted RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 BCAR3O75815 825 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 DNAJB5O75953 348 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 PAK4O96013 591 aaPredicted RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 HNRNPCP07910 306 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 COL6A2P12110 1019 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 LCP1P13796 627 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 HSP90B1P14625 803 aaKnown RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 MC4RP32245 332 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 LMO4P61968 165 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 FAM102AQ5T9C2 384 aaPredicted RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 BTBD8Q5XKL5 378 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 KIAA0895LQ68EN5 471 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 ALG1LQ6GMV1 187 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 PLEKHA7Q6IQ23 1121 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 PDXDC1Q6P996 788 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 CATSPERGQ6ZRH7 1159 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 FAM196AQ6ZSG2 479 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 DOK3Q7L591 496 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 TMC7Q7Z402 723 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 XYLT1Q86Y38 959 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 SPATA2LQ8IUW3 424 aaPredicted RBP0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 MAPKAPK5Q8IW41 473 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 OR10H5Q8NGA6 315 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 TFAP2BQ92481 460 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 ZNF428Q96B54 188 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 GALNT9Q9HCQ5 603 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 CYP26B1Q9NR63 512 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 NCKIPSDQ9NZQ3 722 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 POGKQ9P215 609 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 MAGEL2Q9UJ55 1249 aa0.28□□□□□ -2.36
RNU6-540P-201ENST00000384622 AKT3Q9Y243 479 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms