RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
SHOX-202ENST00000381575 NR2E1Q9Y466 385 aa15.68■□□□□ 0.1
SHOX-202ENST00000381575 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
SHOX-202ENST00000381575 ARHGEF35A5YM69 484 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 CARNS1A5YM72 827 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 INPPL1O15357 1258 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 LILRB3O75022 631 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 SOD2P04179 222 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 NHLH1Q02575 133 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 PCBP1Q15365 356 aaKnown RBP eCLIP15.67■□□□□ 0.1
SHOX-202ENST00000381575 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 ALYREFQ86V81 257 aaKnown RBP15.67■□□□□ 0.1
SHOX-202ENST00000381575 GLYCTKQ8IVS8 523 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 GSTCDQ8NEC7 633 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 ASIC4Q96FT7 647 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 NECTIN4Q96NY8 510 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 NACC1Q96RE7 527 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 NFKBIZQ9BYH8 718 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 CXCL16Q9H2A7 254 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 VPS13AQ96RL7 3174 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 WDR87Q6ZQQ6 2873 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 USP34Q70CQ2 3546 aa15.67■□□□□ 0.1
SHOX-202ENST00000381575 A0A1B0GUA9 196 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 TEX28O15482 410 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 BRD1O95696 1058 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 SPATA31D3P0C874 917 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 XRCC6P12956 609 aaKnown RBP eCLIP15.66■□□□□ 0.1
SHOX-202ENST00000381575 RPA1P27694 616 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 RBM25P49756 843 aaKnown RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 ATAT1Q5SQI0 421 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 CDCA2Q69YH5 1023 aaPredicted RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 SPATA31D4Q6ZUB0 917 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 ZBTB8OSQ8IWT0 167 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 SUGP1Q8IWZ8 645 aaKnown RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 FBXL6Q8N531 539 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 C4orf32Q8N8J7 132 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 TDRD5Q8NAT2 981 aaKnown RBP15.66■□□□□ 0.1
SHOX-202ENST00000381575 MCPH1Q8NEM0 835 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 PRSS33Q8NF86 280 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 ERMNQ8TAM6 284 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 HASPINQ8TF76 798 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 PAAF1Q9BRP4 392 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 PDZD7Q9H5P4 517 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 SFXN1Q9H9B4 322 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 MAN1C1Q9NR34 630 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 LIMD1Q9UGP4 676 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 GIT1Q9Y2X7 761 aa15.66■□□□□ 0.1
SHOX-202ENST00000381575 CITO14578 2027 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 PP2D1A8MPX8 630 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 PRKCBP05771 671 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 RPL17P18621 184 aaKnown RBP15.65■□□□□ 0.1
SHOX-202ENST00000381575 GLUD2P49448 558 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 TOB1P50616 345 aaPredicted RBP15.65■□□□□ 0.1
SHOX-202ENST00000381575 EEF1DP3Q658K8 133 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 BMP8AQ7Z5Y6 402 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 PPFIBP1Q86W92 1011 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 HACE1Q8IYU2 909 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
SHOX-202ENST00000381575 RPS6KC1Q96S38 1066 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 GPR62Q9BZJ7 368 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 SH2B1Q9NRF2 756 aaPredicted RBP15.65■□□□□ 0.1
SHOX-202ENST00000381575 PRMT7Q9NVM4 692 aaPredicted RBP15.65■□□□□ 0.1
SHOX-202ENST00000381575 SNTG2Q9NY99 539 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 PCDHB6Q9Y5E3 794 aa15.65■□□□□ 0.1
SHOX-202ENST00000381575 ZFHX2Q9C0A1 2572 aaPredicted RBP15.65■□□□□ 0.1
SHOX-202ENST00000381575 CASTOR2A6NHX0 329 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 RFPL2O75678 378 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 EFEMP2O95967 443 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 CYP11B2P19099 503 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 KIAA0319Q5VV43 1072 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 FUT10Q6P4F1 479 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 GPR149Q86SP6 731 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 RNF168Q8IYW5 571 aaPredicted RBP15.64■□□□□ 0.09
SHOX-202ENST00000381575 PHOX2BQ99453 314 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 CCDC113Q9H0I3 377 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 BHMT2Q9H2M3 363 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 FZD8Q9H461 694 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 LRWD1Q9UFC0 647 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 NOL7Q9UMY1 257 aaKnown RBP15.64■□□□□ 0.09
SHOX-202ENST00000381575 SORCS3Q9UPU3 1222 aa15.64■□□□□ 0.09
SHOX-202ENST00000381575 RECQL4O94761 1208 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 ADH1AP07327 375 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 CDC25AP30304 524 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 DSG1Q02413 1049 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 GRIK3Q13003 919 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 PTGDRQ13258 359 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 PRPF4BQ13523 1007 aaKnown RBP15.63■□□□□ 0.09
SHOX-202ENST00000381575 MTMR3Q13615 1198 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 PALB2Q86YC2 1186 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 DEPTORQ8TB45 409 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 SNX29Q8TEQ0 813 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 COLEC11Q9BWP8 271 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 DDX19AQ9NUU7 478 aaKnown RBP15.63■□□□□ 0.09
SHOX-202ENST00000381575 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
SHOX-202ENST00000381575 KIAA1024Q9UPX6 916 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms