RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CCSER1Q9C0I3 900 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 KLHL11Q9NVR0 708 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 FAM187AA6NFU0 413 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CYP27B1O15528 508 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 PRPSAP2O60256 369 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 HAUS5O94927 633 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 PAPOLAP51003 745 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ST3GAL1Q11201 340 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 DYNC1I2Q13409 638 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 P3H1Q32P28 736 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 MIGA2Q7L4E1 593 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 SESTD1Q86VW0 696 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 RHOT1Q8IXI2 618 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CNBD2Q96M20 576 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 REEP2Q9BRK0 252 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 UPF3AQ9H1J1 476 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 PABPC3Q9H361 631 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 MARCOQ9UEW3 520 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ZBED1O96006 694 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 FAM153BP0C7A2 387 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 TCN1P20061 433 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 HOXA7P31268 230 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 SERPINB4P48594 390 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 RCAN1P53805 252 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 KCNMA1Q12791 1236 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 FAM153CQ494X1 144 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 LVRNQ6Q4G3 990 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 PPM1NQ8N819 430 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 C9orf72Q96LT7 481 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 STK33Q9BYT3 514 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ANO3Q9BYT9 981 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CCDC90BQ9GZT6 254 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 FAM153AQ9UHL3 310 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 KNDC1Q76NI1 1749 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 GDF11O95390 407 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 TRIM49P0CI25 452 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 TRIM49CP0CI26 452 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ITIH2P19823 946 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CTCFP49711 727 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CACNB3P54284 484 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 KLHDC7AQ5VTJ3 777 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 PDXDC2PQ6P474 469 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 GJB7Q6PEY0 223 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CNPY4Q8N129 248 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ZKSCAN4Q969J2 545 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 OLFM3Q96PB7 478 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 TMEM237Q96Q45 408 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 XPO6Q96QU8 1125 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 NGRNQ9NPE2 291 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 DONSONQ9NYP3 566 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ORC6Q9Y5N6 252 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 AKAP12Q02952 1782 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ESYT2A0FGR8 921 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 SYCE1LA8MT33 242 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 KCNN4O15554 427 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ATP2B4P23634 1241 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 USP11P51784 963 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 STAT4Q14765 748 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 NT5DC1Q5TFE4 455 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 PRPF39Q86UA1 669 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ATL2Q8NHH9 583 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 EPS8L3Q8TE67 593 aaKnown RBP4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ERGIC2Q96RQ1 377 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 ING2Q9H160 280 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 BAG5Q9UL15 447 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 AKT3Q9Y243 479 aa4.45□□□□□ -1.7
BRCA2-201ENST00000380152 CPS1P31327 1500 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 PFASO15067 1338 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 ORC4O43929 436 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 PAX7P23759 505 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 MRPS35P82673 323 aaKnown RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 NR1H3Q13133 447 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 CYTH1Q15438 398 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 ANO5Q75V66 913 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 STAMBPL1Q96FJ0 436 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 MIS12Q9H081 205 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 PCSK1NQ9UHG2 260 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 SMG5Q9UPR3 1016 aaKnown RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 PIK3R2O00459 728 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 DNAJC8O75937 253 aaPredicted RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 KRT38O76015 456 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 AP1B1Q10567 949 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 TAF12Q16514 161 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 KLHL38Q2WGJ6 581 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 TAF1BQ53T94 588 aaPredicted RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 RABGAP1LQ5R372 815 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 RARS2Q5T160 578 aaKnown RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 PDXDC1Q6P996 788 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 MCF2L2Q86YR7 1114 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 ZBTB8OSQ8IWT0 167 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 PRPF38AQ8NAV1 312 aaKnown RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 DNAJC9Q8WXX5 260 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 THAP2Q9H0W7 228 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 VPS11Q9H270 941 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 TMBIM4Q9HC24 238 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 MYBP10242 640 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 YWHABP31946 246 aaKnown RBP4.44□□□□□ -1.7
BRCA2-201ENST00000380152 ZCWPW2Q504Y3 356 aa4.44□□□□□ -1.7
BRCA2-201ENST00000380152 FSCBQ5H9T9 825 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms