RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SYT2Q8N9I0 419 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 ARHGEF26Q96DR7 871 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SPDL1Q96EA4 605 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SEMA4AQ9H3S1 761 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 USP15Q9Y4E8 981 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 DDX3XO00571 662 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■□□□ 13.3
SMAD9-202ENST00000379826 RTN2O75298 545 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 NOL4O94818 638 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 MSH2P43246 934 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SGSM3Q96HU1 749 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 DDX23Q9BUQ8 820 aaKnown RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 TAS2R14Q9NYV8 317 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 LUC7L3O95232 432 aaKnown RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SGPL1O95470 568 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 CD58P19256 250 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 MAN1A1P33908 653 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 TRPC3Q13507 836 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 RCN2Q14257 317 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 KYNUQ16719 465 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SLC51AQ86UW1 340 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 NT5DC3Q86UY8 548 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SCYL3Q8IZE3 742 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 RILPQ96NA2 401 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 GANQ9H2C0 597 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 PABPC3Q9H361 631 aaKnown RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SPATA31A5Q5VU36 1347 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 SPATA31A7Q8IWB4 1347 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 A0A0G2JND7 137 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 ZBTB39O15060 712 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 SKAP2O75563 359 aaPredicted RBP12.15□□□□□ -0.46
SMAD9-202ENST00000379826 MAPK7Q13164 816 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 C2CD6Q53TS8 623 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 HAS1Q92839 578 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 DNAJC19Q96DA6 116 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 IKZF4Q9H2S9 585 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
SMAD9-202ENST00000379826 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 HNRNPH3P31942 346 aaKnown RBP12.15□□□□□ -0.46
SMAD9-202ENST00000379826 PPP4CP60510 307 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 EPHA7Q15375 998 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 C9orf72Q96LT7 481 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 DPEP1P16444 411 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 CDC25CP30307 473 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 COILP38432 576 aaPredicted RBP12.15□□□□□ -0.46
SMAD9-202ENST00000379826 ERFP50548 548 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 XXYLT1Q8NBI6 393 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 CCHCR1Q8TD31 782 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 C11orf70Q9BRQ4 267 aa12.15□□□□□ -0.46
SMAD9-202ENST00000379826 CPSF2Q9P2I0 782 aaKnown RBP12.15□□□□□ -0.46
SMAD9-202ENST00000379826 CFAP73A6NFT4 308 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 ZBBXA8MT70 800 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 I3L4J1 428 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 STAM2O75886 525 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 RPA1P27694 616 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 PHBP35232 272 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 COA1Q9GZY4 146 aa12.15□□□□□ -0.47
SMAD9-202ENST00000379826 MAPK13O15264 365 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 ITGA8P53708 1063 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 SLC12A3P55017 1021 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 RASA3Q14644 834 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 IZUMO3Q5VZ72 239 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 CD302Q8IX05 232 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 TDRD3Q9H7E2 651 aaKnown RBP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 EIF2AK2P19525 551 aaKnown RBP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 RPL21P46778 160 aaKnown RBP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 SYCP2LQ5T4T6 812 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 HSPBP1Q9NZL4 362 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 CSPG5O95196 566 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 ANKMY2Q8IV38 441 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 POP1Q99575 1024 aaKnown RBP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 ZSWIM1Q9BR11 485 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 VCXQ9H320 206 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 ZWILCHQ9H900 591 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 LCA5LO95447 670 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 RAD23BP54727 409 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 YWHAGP61981 247 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMAD9-202ENST00000379826 MTM1Q13496 603 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 C4orf33Q8N1A6 199 aa12.14□□□□□ -0.47
SMAD9-202ENST00000379826 NSMCE1Q8WV22 266 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms