RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 EHD1Q9H4M9 534 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 SLITRK6Q9H5Y7 841 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 VTA1Q9NP79 307 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 USP40Q9NVE5 1235 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 TTC7AQ9ULT0 858 aaPredicted RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PHTF1Q9UMS5 762 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 XDHP47989 1333 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 TESPA1A2RU30 521 aaPredicted RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PABPC1P11940 636 aaKnown RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 TAC1P20366 129 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PRKACBP22694 351 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 FOXN2P32314 431 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PGM1P36871 562 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PFKPQ01813 784 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 SSRP1Q08945 709 aaKnown RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 STRN3Q13033 797 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 MPP2Q14168 576 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 NAB2Q15742 525 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 EXOC3L4Q17RC7 722 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 SYCP2LQ5T4T6 812 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 VSTM1Q6UX27 236 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 ANKMY2Q8IV38 441 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 CRACR2BQ8N4Y2 399 aaPredicted RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 OR6Y1Q8NGX8 325 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 GSDMBQ8TAX9 411 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PIP4K2CQ8TBX8 421 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 NEURL2Q9BR09 285 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 EPB41L1Q9H4G0 881 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 SLCO1B3Q9NPD5 702 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 GID8Q9NWU2 228 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 RRN3Q9NYV6 651 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 DMTF1Q9Y222 760 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PLEKHG1Q9ULL1 1385 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 CCDC162PA2VCL2 907 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 TRIM75PA6NK02 468 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 KRT75O95678 551 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CSE1LP55060 971 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 AP2B1P63010 937 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 IL9RQ01113 521 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ZBTB16Q05516 673 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 GRAMD2AQ8IUY3 354 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 GOLM1Q8NBJ4 401 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 NCOA7Q8NI08 942 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 PYROXD1Q8WU10 500 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 GLG1Q92896 1179 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 MKNK1Q9BUB5 465 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CDK19Q9BWU1 502 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 PAIP1Q9H074 479 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 UBN1Q9NPG3 1134 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 RABGAP1Q9Y3P9 1069 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 PITPNM2Q9BZ72 1349 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 MYH6P13533 1939 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ANKRD34BA5PLL1 514 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 H3BSA7 217 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ACSL3O95573 720 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ENO2P09104 434 aaPredicted RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 VCLP18206 1134 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 BDNFP23560 247 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 SLC16A2P36021 539 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 DR1Q01658 176 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 RAPH1Q70E73 1250 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 SRRM1Q8IYB3 904 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ADSSL1Q8N142 457 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 GALNT4Q8N4A0 578 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 METTL13Q8N6R0 699 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ZNF280CQ8ND82 737 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ANKS1AQ92625 1134 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CRAMP1Q96RY5 1269 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 PACSIN1Q9BY11 444 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 NAPBQ9H115 298 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 MTRF1LQ9UGC7 380 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 SATB2Q9UPW6 733 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 A0A1W2PRG0 241 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 TRAFD1O14545 582 aaPredicted RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CIB2O75838 187 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 FUCA1P04066 466 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 TFAP2AP05549 437 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CRABP2P29373 138 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 VCPP55072 806 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 DLG1Q12959 904 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 RALGDSQ12967 914 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 CWF19L2Q2TBE0 894 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 MCF2L2Q86YR7 1114 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 SUN5Q8TC36 379 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ACTRT1Q8TDG2 376 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 APPBP2Q92624 585 aa9.04□□□□□ -0.96
NHLRC3-201ENST00000379599 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms