RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 IPPQ9Y573 584 aa13.06□□□□□ -0.32
PCNA-201ENST00000379143 MUC3AQ02505 3323 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 MYBP10242 640 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 ITGA4P13612 1032 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
PCNA-201ENST00000379143 CASP5P51878 434 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 MCL1Q07820 350 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCNA-201ENST00000379143 KYAT1Q16773 422 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 GLB1LQ6UWU2 654 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
PCNA-201ENST00000379143 TMCO2Q7Z6W1 182 aaPredicted RBP13.05□□□□□ -0.32
PCNA-201ENST00000379143 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
PCNA-201ENST00000379143 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
PCNA-201ENST00000379143 SYCP3Q8IZU3 236 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 ZNF507Q8TCN5 953 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 SMARCE1Q969G3 411 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 ZNF689Q96CS4 500 aaPredicted RBP13.05□□□□□ -0.32
PCNA-201ENST00000379143 PBX4Q9BYU1 374 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 SLC39A2Q9NP94 309 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
PCNA-201ENST00000379143 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 MBD3O95983 291 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 DNAJB2P25686 324 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 MATR3P43243 847 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCNA-201ENST00000379143 RABGGTBP53611 331 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 SMG8Q8ND04 991 aaKnown RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 HPS3Q969F9 1004 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 CCDC94Q9BW85 323 aaPredicted RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 MRPL9Q9BYD2 267 aaKnown RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 TMEM117Q9H0C3 514 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 CDT1Q9H211 546 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 NXF3Q9H4D5 531 aaKnown RBP13.04□□□□□ -0.32
PCNA-201ENST00000379143 RSAD1Q9HA92 442 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 ANKFY1Q9P2R3 1169 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 GIT1Q9Y2X7 761 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 PCDHA5Q9Y5H7 936 aa13.04□□□□□ -0.32
PCNA-201ENST00000379143 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
PCNA-201ENST00000379143 FGFR1P11362 822 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 PTMSP20962 102 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 GRM5P41594 1212 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 STK4Q13043 487 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 BTG3Q14201 252 aaPredicted RBP13.03□□□□□ -0.32
PCNA-201ENST00000379143 BMT2Q1RMZ1 405 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 AGMOQ6ZNB7 445 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 TIFAQ96CG3 184 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 FAM161BQ96MY7 647 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 FGFBP2Q9BYJ0 223 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 RC3H2Q9HBD1 1191 aaKnown RBP13.03□□□□□ -0.32
PCNA-201ENST00000379143 TOPORSQ9NS56 1045 aaPredicted RBP13.03□□□□□ -0.32
PCNA-201ENST00000379143 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
PCNA-201ENST00000379143 KANSL3Q9P2N6 904 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 STYXL1Q9Y6J8 313 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 GBF1Q92538 1859 aa13.03□□□□□ -0.32
PCNA-201ENST00000379143 A0A0B4J269 797 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 CARNS1A5YM72 827 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 TBKBP1A7MCY6 615 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 ABLIM1O14639 778 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 KIAA0391O15091 583 aaKnown RBP13.02□□□□□ -0.33
PCNA-201ENST00000379143 OGTO15294 1046 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 OFD1O75665 1012 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 CA3P07451 260 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 GARTP22102 1010 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 MCM4P33991 863 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 PBX2P40425 430 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.33
PCNA-201ENST00000379143 KCNA1Q09470 495 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
PCNA-201ENST00000379143 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.33
PCNA-201ENST00000379143 ZNF658Q5TYW1 1059 aaPredicted RBP13.02□□□□□ -0.33
PCNA-201ENST00000379143 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 LRRC43Q8N309 656 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 GLIS3Q8NEA6 775 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 LPPQ93052 612 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 ZBTB45Q96K62 511 aaPredicted RBP13.02□□□□□ -0.33
PCNA-201ENST00000379143 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms