RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 RNF40O75150 1001 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 HLA-DRAP01903 254 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 ZBTB16Q05516 673 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 TRIP13Q15645 432 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 ARMCX2Q7L311 632 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 DNERQ8NFT8 737 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 SLC30A5Q8TAD4 765 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PRPF31Q8WWY3 499 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 TRPM3Q9HCF6 1732 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 ASAP2O43150 1006 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 CYP2C8P10632 490 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PSMA2P25787 234 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 MAP2K2P36507 400 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 GCLCP48506 637 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 CLCN3P51790 818 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 AP3M2P53677 418 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PPATQ06203 517 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 C4orf32Q8N8J7 132 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 ANKS4BQ8N8V4 417 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PIN4Q9Y237 131 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 COL1A1P02452 1464 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 HUS1O60921 280 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 TRIM65Q6PJ69 517 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 REXO1L1PQ8IX06 675 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 PALM2Q8IXS6 379 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 HVCN1Q96D96 273 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 MMTAG2Q9BU76 263 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 DDX47Q9H0S4 455 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 TMEM8AQ9HCN3 771 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 NFU1Q9UMS0 254 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 ASTN2O75129 1339 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 A0A087X0T9 212 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 PRPSAP2O60256 369 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 FAM228BP0C875 321 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 ITGB5P18084 799 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 NLRP11P59045 1033 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 LMNB2Q03252 620 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 DHX9Q08211 1270 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 NIPA1Q7RTP0 329 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 IL31RAQ8NI17 732 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 ZWILCHQ9H900 591 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 MED4Q9NPJ6 270 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 AGAP1Q9UPQ3 857 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 DR1Q01658 176 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 NYAP1Q6ZVC0 841 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 SNX12Q9UMY4 172 aa15.16■□□□□ 0.02
SHROOM1-203ENST00000378679 CYP3A7-CYP3A51PA0A087WV96 503 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 ZNF185O15231 689 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 KLRC4O43908 158 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 PSMD10O75832 226 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 CYP3A7P24462 503 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 KLRC1P26715 233 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 PON1P27169 355 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 MAN1A1P33908 653 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 SNRPFP62306 86 aaKnown RBP15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 CASP8Q14790 479 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 LY6KQ17RY6 165 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 METTL7BQ6UX53 244 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 TAOK1Q7L7X3 1001 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 KCTD6Q8NC69 237 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 SAMD15Q9P1V8 674 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 LRFN2Q9ULH4 789 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 CYP2C9P11712 490 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 GNASQ5JWF2 1037 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 SREK1Q8WXA9 508 aaKnown RBP15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 CPA4Q9UI42 421 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 ESYT3A0FGR9 886 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 ATP8B1O43520 1251 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 CTSHP09668 335 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 TGFB3P10600 412 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 SCP2P22307 547 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 NAB2Q15742 525 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 NPY5RQ15761 445 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 EPC2Q52LR7 807 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 SPATA4Q8NEY3 305 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 KLRG1Q96E93 195 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 DNAJC7Q99615 494 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 IFT122Q9HBG6 1241 aa15.15■□□□□ 0.02
SHROOM1-203ENST00000378679 PDHXO00330 501 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 EXTL3O43909 919 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 TADA3O75528 432 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 CALB1P05937 261 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 SLC12A3P55017 1021 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 ARPP19P56211 112 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 PSMC1P62191 440 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 KCNA1Q09470 495 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 RNF25Q96BH1 459 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 RUNDC3BQ96NL0 473 aa15.14■□□□□ 0.01
SHROOM1-203ENST00000378679 PRMT7Q9NVM4 692 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms