RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ADAM33Q9BZ11 813 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 C2orf40Q9H1Z8 148 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 SMYD2Q9NRG4 433 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 RTN2O75298 545 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CRCPO75575 148 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 PON1P27169 355 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 TMEM62Q0P6H9 643 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 NCOA4Q13772 614 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 LRRN4CLQ8ND94 238 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 RBM41Q96IZ5 413 aaKnown RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 MKNK1Q9BUB5 465 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 GRID2IPA4D2P6 1211 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 WNT10BO00744 389 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 EIF3DO15371 548 aaKnown RBP eCLIP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 KRT14P02533 472 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CALB1P05937 261 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 VCAM1P19320 739 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 KCNJ1P48048 391 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 IRX4P78413 519 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CCNI2Q6ZMN8 369 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 ARHGEF18Q6ZSZ5 1173 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 SPON1Q9HCB6 807 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 F5H423 210 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CIB2O75838 187 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 PCK1P35558 622 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 SOX10P56693 466 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 ACTR2P61160 394 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 FAM102AQ5T9C2 384 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 ENOSF1Q7L5Y1 443 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 PNKPQ96T60 521 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 PPP1R12CQ9BZL4 782 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 ALG6Q9Y672 507 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 PDE4DIPQ5VU43 2346 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 CHRNA3P32297 505 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 CENPUQ71F23 418 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 RHOT1Q8IXI2 618 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 SLC16A10Q8TF71 515 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 CDKL2Q92772 493 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 KIF12Q96FN5 646 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 FAM198AQ9UFP1 575 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 PFASO15067 1338 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 HLA-DRAP01903 254 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 MT-ND3P03897 115 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 EFNA5P52803 228 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 MTM1Q13496 603 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 PSMD6Q15008 389 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 SMAD1Q15797 465 aaKnown RBP14.06□□□□□ -0.16
NPHP4-203ENST00000378169 CCDC38Q502W7 563 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 C6orf118Q5T5N4 469 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 MMS22LQ6ZRQ5 1243 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 RAB3IL1Q8TBN0 382 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 GIPC1O14908 333 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 PMS2P54278 862 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 BACE1P56817 501 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 FAM133BQ5BKY9 247 aaKnown RBP14.06□□□□□ -0.16
NPHP4-203ENST00000378169 FAM47EQ6ZV65 393 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 ARMCX2Q7L311 632 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 GABPB2Q8TAK5 448 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-203ENST00000378169 POP1Q99575 1024 aaKnown RBP14.06□□□□□ -0.16
NPHP4-203ENST00000378169 ELAC2Q9BQ52 826 aaKnown RBP14.06□□□□□ -0.16
NPHP4-203ENST00000378169 BEGAINQ9BUH8 593 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 WNT8AQ9H1J5 351 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 SLITRK6Q9H5Y7 841 aa14.06□□□□□ -0.16
NPHP4-203ENST00000378169 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.06□□□□□ -0.16
NPHP4-203ENST00000378169 GAKO14976 1311 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 EML1O00423 815 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 GPS1Q13098 491 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 FASTKD5Q7L8L6 764 aaKnown RBP14.05□□□□□ -0.16
NPHP4-203ENST00000378169 SH3RF1Q7Z6J0 888 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 OR2W6PQ8NHA6 318 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 IDI2Q9BXS1 227 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 TARSL2A2RTX5 802 aaKnown RBP14.05□□□□□ -0.16
NPHP4-203ENST00000378169 RAD51CO43502 376 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 MMEP08473 750 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 COMTP21964 271 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 HERVK_113P62684 666 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 ADCY2Q08462 1091 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 FUT2Q10981 343 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 IL17AQ16552 155 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-203ENST00000378169 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 SYTL5Q8TDW5 730 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-203ENST00000378169 TMEM117Q9H0C3 514 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 IFT122Q9HBG6 1241 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 PPP1R9AQ9ULJ8 1098 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 CCDC160A6NGH7 325 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 FGFR4P22455 802 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 RBBP8NLQ8NC74 664 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-203ENST00000378169 CCT6BQ92526 530 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 ELMO3Q96BJ8 720 aa14.05□□□□□ -0.16
NPHP4-203ENST00000378169 RSRC1Q96IZ7 334 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms