RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 HOXD13P35453 343 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 STRN3Q13033 797 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 SIX1Q15475 284 aaPredicted RBP16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 CCDC6Q16204 474 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 ARHGEF18Q6ZSZ5 1173 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 DTX3LQ8TDB6 740 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 C10orf82Q8WW14 230 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 GCNT4Q9P109 453 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 NAALADL1Q9UQQ1 740 aa16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.27
CSNK1A1-202ENST00000377843 ITGB4P16144 1822 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 TMEM110-MUSTN1A8MSY1 372 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 KLRF2D3W0D1 207 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 ZCCHC18P0CG32 403 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 PYGMP11217 842 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 SKIP12755 728 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 CASP4P49662 377 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 NEK3P51956 506 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 KPNB1Q14974 876 aaKnown RBP16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 LRRC74BQ6ZQY2 392 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 FBXO41Q8TF61 875 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 OPTNQ96CV9 577 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 DTNBP1Q96EV8 351 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 GBP5Q96PP8 586 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 PLEKHG4BQ96PX9 1271 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 C6orf50Q9HD87 102 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 NKIRAS1Q9NYS0 192 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 MAGEA13PA6NCF6 341 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 CAPN9O14815 690 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 ETS2P15036 469 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 PTPN4P29074 926 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 TMEM266Q2M3C6 531 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 SDCCAG8Q86SQ7 713 aaPredicted RBP16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 KRT82Q9NSB4 513 aa16.76■□□□□ 0.27
CSNK1A1-202ENST00000377843 COL4A1P02462 1669 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 SPAG7O75391 227 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 TTC4O95801 387 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 ATP5DP30049 168 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 INHBCP55103 352 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 CTC1Q2NKJ3 1217 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 EDRF1Q3B7T1 1238 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 WDR72Q3MJ13 1102 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 RHBDF2Q6PJF5 856 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 RBM12BQ8IXT5 1001 aaKnown RBP16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 SPIRE2Q8WWL2 714 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 NCSTNQ92542 709 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 ZHX3Q9H4I2 956 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 LOC102724428A0A0B4J2F2 783 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 ASMTLO95671 621 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 SIK1P57059 783 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 FRMD5Q7Z6J6 570 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 REXO1Q8N1G1 1221 aaKnown RBP16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 BCAS3Q9H6U6 928 aa16.75■□□□□ 0.27
CSNK1A1-202ENST00000377843 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 LMNAP02545 664 aaKnown RBP16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 FGFR1P11362 822 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 XRCC5P13010 732 aaKnown RBP16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 MECOMQ03112 1051 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 WDR60Q8WVS4 1066 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 NSUN4Q96CB9 384 aaKnown RBP16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 TMEM47Q9BQJ4 181 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 ZSWIM1Q9BR11 485 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 SPATA16Q9BXB7 569 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 GALNT8Q9NY28 637 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 ATXN10Q9UBB4 475 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 WASF2Q9Y6W5 498 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 MAGEB2O15479 319 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 GNA11P29992 359 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 STAT1P42224 750 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 IL9RQ01113 521 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 CYP1B1Q16678 543 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 EPM2AIP1Q7L775 607 aaPredicted RBP16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 GPBP1Q86WP2 473 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 CCDC65Q8IXS2 484 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 SLC44A5Q8NCS7 719 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 HAS1Q92839 578 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 NINJ2Q9NZG7 142 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 LGALS13Q9UHV8 139 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
CSNK1A1-202ENST00000377843 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 DCTN3O75935 186 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 LYNP07948 512 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 CYP11B2P19099 503 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 SOX5P35711 763 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 RTP1P59025 263 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 SLC34A1Q06495 639 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 PLEKHG4Q58EX7 1191 aa16.73■□□□□ 0.27
CSNK1A1-202ENST00000377843 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms