RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
C9orf135-201ENST00000377197 NXF1Q9UBU9 619 aaKnown RBP11.22□□□□□ -0.61
C9orf135-201ENST00000377197 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
C9orf135-201ENST00000377197 ZBTB39O15060 712 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 SPINT1O43278 529 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
C9orf135-201ENST00000377197 RB1P06400 928 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 BMPR1AP36894 532 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
C9orf135-201ENST00000377197 RARRES1P49788 294 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 GATMP50440 423 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 TIGD5Q53EQ6 642 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
C9orf135-201ENST00000377197 INSM2Q96T92 566 aaPredicted RBP11.21□□□□□ -0.61
C9orf135-201ENST00000377197 PLVAPQ9BX97 442 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 TUFT1Q9NNX1 390 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 DACT1Q9NYF0 836 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 PIN4Q9Y237 131 aaKnown RBP11.21□□□□□ -0.61
C9orf135-201ENST00000377197 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
C9orf135-201ENST00000377197 TTLL8A6PVC2 850 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 TBKBP1A7MCY6 615 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 LAD1O00515 517 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 ASAP2O43150 1006 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 MED24O75448 989 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 ADH1AP07327 375 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 SPATA31C1P0DKV0 1188 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 FGFR1P11362 822 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 SCTRP47872 440 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 TOB1P50616 345 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-201ENST00000377197 LAMTOR4Q0VGL1 99 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 RILPL1Q5EBL4 403 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 SPOUT1Q5T280 376 aaKnown RBP11.2□□□□□ -0.62
C9orf135-201ENST00000377197 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 CATSPER4Q7RTX7 472 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 CATSPER3Q86XQ3 398 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 ECHDC2Q86YB7 292 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 PIGOQ8TEQ8 1089 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 PRPF31Q8WWY3 499 aaKnown RBP11.2□□□□□ -0.62
C9orf135-201ENST00000377197 P2RX5Q93086 422 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-201ENST00000377197 RAB34Q9BZG1 259 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 XPNPEP1Q9NQW7 623 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 CHST12Q9NRB3 414 aa11.2□□□□□ -0.62
C9orf135-201ENST00000377197 NCOR1O75376 2440 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 A0A0U1RQF3 1178 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 FAM86C2PA6NEL3 165 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
C9orf135-201ENST00000377197 SRGAP2CP0DJJ0 459 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 XRCC6P12956 609 aaKnown RBP eCLIP11.19□□□□□ -0.62
C9orf135-201ENST00000377197 MUTP22033 750 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 RPA1P27694 616 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 PHKA2P46019 1235 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 FAM189BP81408 668 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 CUL4AQ13619 759 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 TFDP1Q14186 410 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 MXD4Q14582 209 aaPredicted RBP11.19□□□□□ -0.62
C9orf135-201ENST00000377197 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
C9orf135-201ENST00000377197 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 C4orf32Q8N8J7 132 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 RNF149Q8NC42 400 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 RNF169Q8NCN4 708 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 LMAN2LQ9H0V9 348 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 AGPAT5Q9NUQ2 364 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 LRWD1Q9UFC0 647 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 DBR1Q9UK59 544 aaKnown RBP11.19□□□□□ -0.62
C9orf135-201ENST00000377197 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
C9orf135-201ENST00000377197 GRM6O15303 877 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 ERLIN2O94905 339 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 SKIP12755 728 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
C9orf135-201ENST00000377197 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
C9orf135-201ENST00000377197 CCT6AP40227 531 aaKnown RBP11.18□□□□□ -0.62
C9orf135-201ENST00000377197 PRPHP41219 470 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 RAB27AP51159 221 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 CAPSQ13938 189 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
C9orf135-201ENST00000377197 IGSF22Q8N9C0 903 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 ASAP3Q8TDY4 903 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 SNX29Q8TEQ0 813 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 NACC1Q96RE7 527 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 TRAIPQ9BWF2 469 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 POLR3FQ9H1D9 316 aaPredicted RBP11.18□□□□□ -0.62
C9orf135-201ENST00000377197 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
C9orf135-201ENST00000377197 MINDY3Q9H8M7 445 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 RNF19AQ9NV58 838 aa11.18□□□□□ -0.62
C9orf135-201ENST00000377197 BDP1A6H8Y1 2624 aa11.17□□□□□ -0.62
C9orf135-201ENST00000377197 A0A087WWV3 80 aa11.17□□□□□ -0.62
C9orf135-201ENST00000377197 ARHGEF35A5YM69 484 aa11.17□□□□□ -0.62
C9orf135-201ENST00000377197 CSPG5O95196 566 aa11.17□□□□□ -0.62
C9orf135-201ENST00000377197 EOMESO95936 686 aa11.17□□□□□ -0.62
C9orf135-201ENST00000377197 ITGB1P05556 798 aa11.17□□□□□ -0.62
C9orf135-201ENST00000377197 LAG3P18627 525 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms