RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CFAP45Q9UL16 551 aa24.3■■□□□ 1.48
SRM-201ENST00000376957 BMP1P13497 986 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 KCNQ1P51787 676 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 YARSP54577 528 aaKnown RBP24.29■■□□□ 1.48
SRM-201ENST00000376957 ERVFC1P60507 584 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 GRIN1Q05586 938 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 GRIK3Q13003 919 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 MAPK7Q13164 816 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 BECN1Q14457 450 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 COL19A1Q14993 1142 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 PLPP4Q5VZY2 271 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 ZNF280BQ86YH2 543 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 EPSTI1Q96J88 318 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 RNF39Q9H2S5 420 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 MYH11P35749 1972 aa24.29■■□□□ 1.48
SRM-201ENST00000376957 UNC80Q8N2C7 3258 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 FSCN2O14926 492 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 SPTLC2O15270 562 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 SLC16A4O15374 487 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 YEATS4O95619 227 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 OR1G1P47890 313 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 SLC11A1P49279 550 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 SCNN1GP51170 649 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 ADAM15Q13444 863 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 MCM6Q14566 821 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 SPECC1Q5M775 1068 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 VPS52Q8N1B4 723 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 MYCT1Q8N699 235 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 COLEC11Q9BWP8 271 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 ZHX3Q9H4I2 956 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 PARVGQ9HBI0 331 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 TOPORSQ9NS56 1045 aaPredicted RBP24.28■■□□□ 1.48
SRM-201ENST00000376957 DNAJB4Q9UDY4 337 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 SSX2IPQ9Y2D8 614 aa24.28■■□□□ 1.48
SRM-201ENST00000376957 PPP6R2O75170 966 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 DDHD2O94830 711 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 F13A1P00488 732 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 CTC1Q2NKJ3 1217 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 ZNF568Q3ZCX4 644 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 SV2BQ7L1I2 683 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 LINC00301Q8NCQ3 95 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 ZFP42Q96MM3 310 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 UHRF1Q96T88 793 aaPredicted RBP24.27■■□□□ 1.48
SRM-201ENST00000376957 CCDC94Q9BW85 323 aaPredicted RBP24.27■■□□□ 1.48
SRM-201ENST00000376957 SNTG2Q9NY99 539 aa24.27■■□□□ 1.48
SRM-201ENST00000376957 TDRD15B5MCY1 1934 aaKnown RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 NRP1O14786 923 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 CXCL14O95715 111 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 THP07101 528 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 STAT6P42226 847 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 DUSP6Q16828 381 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 ARSHQ5FYA8 562 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 NT5DC1Q5TFE4 455 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 FOXD4L5Q5VV16 416 aaPredicted RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 PTCRAQ6ISU1 281 aaPredicted RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 ADGRD2Q7Z7M1 963 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 COLGALT2Q8IYK4 626 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 MRPL43Q8N983 215 aaKnown RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 KCNG4Q8TDN1 519 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 FOXD4L4Q8WXT5 416 aaPredicted RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 BICD1Q96G01 975 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 CLIC6Q96NY7 704 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 ACO2Q99798 780 aaKnown RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 REEP2Q9BRK0 252 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 LRRC27Q9C0I9 530 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 BLOC1S4Q9NUP1 217 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 KLK14Q9P0G3 267 aa24.26■■□□□ 1.47
SRM-201ENST00000376957 TFIP11Q9UBB9 837 aaKnown RBP24.26■■□□□ 1.47
SRM-201ENST00000376957 H3BQ06 376 aaPredicted RBP24.25■■□□□ 1.47
SRM-201ENST00000376957 AFF1P51825 1210 aaKnown RBP24.25■■□□□ 1.47
SRM-201ENST00000376957 TMEM161BQ8NDZ6 487 aa24.25■■□□□ 1.47
SRM-201ENST00000376957 GDAQ9Y2T3 454 aa24.25■■□□□ 1.47
SRM-201ENST00000376957 NPHP3-ACAD11A0A0J9YXS1 232 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 TTLL13PA6NNM8 815 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 PER2O15055 1255 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 TRAK2O60296 914 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 TOM1L1O75674 476 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 RECQL4O94761 1208 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 MCF2P10911 925 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 MATR3P43243 847 aaKnown RBP eCLIP24.24■■□□□ 1.47
SRM-201ENST00000376957 CACNB1Q02641 598 aaPredicted RBP24.24■■□□□ 1.47
SRM-201ENST00000376957 DSC1Q08554 894 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 MPZL3Q6UWV2 235 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 ZPBP2Q6X784 338 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 HAUS6Q7Z4H7 955 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 FAM178BQ8IXR5 827 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 TARS2Q9BW92 718 aaKnown RBP24.24■■□□□ 1.47
SRM-201ENST00000376957 CD207Q9UJ71 328 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 ATP6V1DQ9Y5K8 247 aa24.24■■□□□ 1.47
SRM-201ENST00000376957 ATG2AQ2TAZ0 1938 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 MYO7AQ13402 2215 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.23■■□□□ 1.47
SRM-201ENST00000376957 K7ENM7 598 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 CLDN3O15551 220 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 CUTAO60888 179 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 CTSAP10619 480 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 MAPTP10636 758 aaKnown RBP24.23■■□□□ 1.47
SRM-201ENST00000376957 GTF2F1P35269 517 aaKnown RBP eCLIP24.23■■□□□ 1.47
SRM-201ENST00000376957 NCKAP1LP55160 1127 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 TUSC3Q13454 348 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms