RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 TRAF3IP3Q9Y228 551 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.59□□□□□ -0.23
DDR1-226ENST00000376569 IGSF9BQ9UPX0 1349 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 GBP2P32456 591 aaPredicted RBP13.59□□□□□ -0.23
DDR1-226ENST00000376569 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
DDR1-226ENST00000376569 PPP2R5DQ14738 602 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 ALS2CLQ60I27 953 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 STYK1Q6J9G0 422 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 WHAMMQ8TF30 809 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
DDR1-226ENST00000376569 JPH1Q9HDC5 661 aaPredicted RBP13.59□□□□□ -0.23
DDR1-226ENST00000376569 INTS9Q9NV88 658 aaKnown RBP13.59□□□□□ -0.23
DDR1-226ENST00000376569 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 RNF14Q9UBS8 474 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 CEP83Q9Y592 693 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 CASZ1Q86V15 1759 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 FOXO6A8MYZ6 492 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 PSAPP07602 524 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 HOXD13P35453 343 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 LONRF1Q17RB8 773 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 TATDN1Q6P1N9 297 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 FAM47EQ6ZV65 393 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 CCDC33Q8N5R6 958 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 PWWP2AQ96N64 755 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 CALN1Q9BXU9 219 aa13.59□□□□□ -0.23
DDR1-226ENST00000376569 ICAM1P05362 532 aa13.58□□□□□ -0.23
DDR1-226ENST00000376569 SRLQ86TD4 932 aa13.58□□□□□ -0.23
DDR1-226ENST00000376569 RAB20Q9NX57 234 aa13.58□□□□□ -0.23
DDR1-226ENST00000376569 RBAKQ9NYW8 714 aaPredicted RBP13.58□□□□□ -0.23
DDR1-226ENST00000376569 SAMD15Q9P1V8 674 aa13.58□□□□□ -0.23
DDR1-226ENST00000376569 BAIAP2L1Q9UHR4 511 aa13.58□□□□□ -0.23
DDR1-226ENST00000376569 DDX60Q8IY21 1712 aaKnown RBP13.58□□□□□ -0.24
DDR1-226ENST00000376569 OPLAHO14841 1288 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 ECEL1O95672 775 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 GAS8O95995 478 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 RWDD2BP57060 319 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 SLC29A2Q14542 456 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 E2F5Q15329 346 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 MMS22LQ6ZRQ5 1243 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 AS3MTQ9HBK9 375 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 SLC9A2Q9UBY0 812 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
DDR1-226ENST00000376569 TELO2Q9Y4R8 837 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 SGK1O00141 431 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 PPP1R21Q6ZMI0 780 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 SV2AQ7L0J3 742 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 ATP6V1G3Q96LB4 118 aa13.58□□□□□ -0.24
DDR1-226ENST00000376569 GRAP2O75791 330 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 CYP3A4P08684 503 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 CLTAP09496 248 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 KRT10P13645 584 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 ATF2P15336 505 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 CDK17Q00537 523 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 RNF149Q8NC42 400 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 TBC1D31Q96DN5 1066 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
DDR1-226ENST00000376569 FAM49AQ9H0Q0 323 aaPredicted RBP13.57□□□□□ -0.24
DDR1-226ENST00000376569 C10orf88Q9H8K7 445 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 ADRB2P07550 413 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 PSMC4P43686 418 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 ERFP50548 548 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 FEZ2Q9UHY8 353 aaPredicted RBP13.57□□□□□ -0.24
DDR1-226ENST00000376569 TBX20Q9UMR3 447 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 RRM1P23921 792 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 GTF2A1P52655 376 aaPredicted RBP13.57□□□□□ -0.24
DDR1-226ENST00000376569 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 TMED2Q15363 201 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 KYNUQ16719 465 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 JAMLQ86YT9 394 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 SRRM1Q8IYB3 904 aaKnown RBP13.57□□□□□ -0.24
DDR1-226ENST00000376569 CACNA2D3Q8IZS8 1091 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.57□□□□□ -0.24
DDR1-226ENST00000376569 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 FBXO40Q9UH90 709 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 PASKQ96RG2 1323 aa13.57□□□□□ -0.24
DDR1-226ENST00000376569 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 GJB1P08034 283 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
DDR1-226ENST00000376569 KRT76Q01546 638 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 SPIRE1Q08AE8 756 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 NOP9Q86U38 636 aaKnown RBP13.56□□□□□ -0.24
DDR1-226ENST00000376569 CTAGE3PQ8IX95 158 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 ZNF280CQ8ND82 737 aa13.56□□□□□ -0.24
DDR1-226ENST00000376569 TCP11Q8WWU5 503 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms