RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 DDX1Q92499 740 aaKnown RBP11.49□□□□□ -0.57
ABCF1-202ENST00000376545 KAT5Q92993 513 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 SEC16BQ96JE7 1060 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 ZNF317Q96PQ6 595 aaPredicted RBP11.49□□□□□ -0.57
ABCF1-202ENST00000376545 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 CCDC134Q9H6E4 229 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 TRPC6Q9Y210 931 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 SNX24Q9Y343 169 aa11.49□□□□□ -0.57
ABCF1-202ENST00000376545 ASTN2O75129 1339 aaPredicted RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 PYGMP11217 842 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 ADSSP30520 456 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 RASA3Q14644 834 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 CROCCP2Q86T23 111 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 ATXN2LQ8WWM7 1075 aaKnown RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 FBXL18Q96ME1 805 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 IWS1Q96ST2 819 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 OSBPL7Q9BZF2 842 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 CCDC169A6NNP5 214 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 TP73O15350 636 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 RASSF9O75901 435 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 SMTNP53814 917 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 PLTPP55058 493 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 IFT88Q13099 833 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 ODF2Q5BJF6 829 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 CCDC137Q6PK04 289 aaKnown RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 ADAT2Q7Z6V5 191 aaKnown RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 SLC13A5Q86YT5 568 aaPredicted RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 MTMR14Q8NCE2 650 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 PSPC1Q8WXF1 523 aaKnown RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 HVCN1Q96D96 273 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 XPO6Q96QU8 1125 aaKnown RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 ACTR5Q9H9F9 607 aaPredicted RBP11.48□□□□□ -0.57
ABCF1-202ENST00000376545 TMOD2Q9NZR1 351 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
ABCF1-202ENST00000376545 YWHABP31946 246 aaKnown RBP11.47□□□□□ -0.57
ABCF1-202ENST00000376545 MXI1P50539 228 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 SLC47A2Q86VL8 602 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 P3H4Q92791 437 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 GLIS2Q9BZE0 524 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-202ENST00000376545 TBC1D22BQ9NU19 505 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 COL4A5P29400 1685 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 AGTP01019 485 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 RARGP13631 454 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 MFAP3P55082 362 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 CDR2Q01850 454 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 IFFO1Q0D2I5 559 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 SLC29A2Q14542 456 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 C6orf118Q5T5N4 469 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 TAX1BP1Q86VP1 789 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 MAP4K3Q8IVH8 894 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 CCDC13Q8IYE1 715 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
ABCF1-202ENST00000376545 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-202ENST00000376545 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
ABCF1-202ENST00000376545 TCRBV7S2A1N4TA0A589 114 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 DDX39AO00148 427 aaKnown RBP11.46□□□□□ -0.57
ABCF1-202ENST00000376545 NFIBO00712 420 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 MMEP08473 750 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 RARAP10276 462 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 CYP11B1P15538 503 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 CHRNA5P30532 468 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 GTF2H1P32780 548 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 ADCY2Q08462 1091 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 SLMAPQ14BN4 828 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 TNIP1Q15025 636 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 DENND2CQ68D51 928 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 MFSD5Q6N075 450 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 MCF2L2Q86YR7 1114 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 TMEM161BQ8NDZ6 487 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 ZNF564Q8TBZ8 553 aaPredicted RBP11.46□□□□□ -0.57
ABCF1-202ENST00000376545 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 SEMA4AQ9H3S1 761 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 TMEM8AQ9HCN3 771 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 CCPG1Q9ULG6 757 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 CLRN2A0PK11 232 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 FSCN2O14926 492 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 CYP26A1O43174 497 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 RIPK2O43353 540 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 MESDQ14696 234 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 SNRNP35Q16560 246 aaKnown RBP11.46□□□□□ -0.57
ABCF1-202ENST00000376545 UGCGQ16739 394 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 ANKRD20A8PQ5CZ79 823 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 KRT39Q6A163 491 aa11.46□□□□□ -0.57
ABCF1-202ENST00000376545 ZNF746Q6NUN9 644 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms