RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 ZBTB45Q96K62 511 aaPredicted RBP23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 C7orf25Q9BPX7 421 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 C11orf84Q9BUA3 381 aaPredicted RBP23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 MIOSQ9NXC5 875 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SNTG2Q9NY99 539 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SEL1LQ9UBV2 794 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PCDHB12Q9Y5F1 795 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 MTCH2Q9Y6C9 303 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 CHD9Q3L8U1 2897 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ARL5CA6NH57 179 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ABLIM1O14639 778 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 INPPL1O15357 1258 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ACTN4O43707 911 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SLFN14P0C7P3 912 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 LAG3P18627 525 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PROZP22891 400 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 NDUFA8P51970 172 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ZC2HC1CQ53FD0 456 aaPredicted RBP23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 CNNM4Q6P4Q7 775 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ZPBP2Q6X784 338 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 FSIP1Q8NA03 581 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 KLHL23Q8NBE8 558 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 P2RX5Q93086 422 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 CDT1Q9H211 546 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ST6GALNAC4Q9H4F1 302 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TBC1D7Q9P0N9 293 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 KANSL3Q9P2N6 904 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PLAGL2Q9UPG8 496 aa23.02■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GRM6O15303 877 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GTPBP6O43824 516 aaPredicted RBP23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 POMCP01189 267 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MLH1P40692 756 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 AFMP43652 599 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZNF568Q3ZCX4 644 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 KCNT2Q6UVM3 1135 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MPZL3Q6UWV2 235 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 APBB1IPQ7Z5R6 666 aaPredicted RBP23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZBTB33Q86T24 672 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZNF280BQ86YH2 543 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CCDC65Q8IXS2 484 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CEP57L1Q8IYX8 460 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MRPS27Q92552 414 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZFP42Q96MM3 310 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 TCHPQ9BT92 498 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GOLPH3LQ9H4A5 285 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 NRDE2Q9H7Z3 1164 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MRPL44Q9H9J2 332 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ALG13Q9NP73 1137 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 LMCD1Q9NZU5 365 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 KLK14Q9P0G3 267 aa23.01■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 TOM1L1O75674 476 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ITGB1P05556 798 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CASP1P29466 404 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 PBX3P40426 434 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 SYKP43405 635 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ASIC1P78348 528 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 RNASELQ05823 741 aaKnown RBP23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GRAMD1CQ8IYS0 662 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GSTCDQ8NEC7 633 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 SPPL3Q8TCT6 385 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 BICD1Q96G01 975 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 PAGE5Q96GU1 130 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZNF558Q96NG5 402 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 STRA6Q9BX79 667 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 BLZF1Q9H2G9 400 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 USP25Q9UHP3 1055 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GDAQ9Y2T3 454 aa23■■□□□ 1.27
MAP1LC3A-202ENST00000374837 B4GALT3O60512 393 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 RECQL4O94761 1208 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 DDHD2O94830 711 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 PIGRP01833 764 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MCF2P10911 925 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 COL9A1P20849 921 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ABCD1P33897 745 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 SCNN1GP51170 649 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 BCAR1P56945 870 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 COASYQ13057 564 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CSPP1Q1MSJ5 1256 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MAP4K3Q8IVH8 894 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 THNSL1Q8IYQ7 743 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CEP120Q8N960 986 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GBP3Q9H0R5 595 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 OLFML3Q9NRN5 406 aa22.99■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ZC3H11AO75152 810 aaKnown RBP eCLIP22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 PPP1R37O75864 691 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 FGF18O76093 207 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 HARSP12081 509 aaKnown RBP22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 GRM5P41594 1212 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 LIG4P49917 911 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CUL4BQ13620 913 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 PTPROQ16827 1216 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 MRPL38Q96DV4 380 aaKnown RBP22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 FGFBP2Q9BYJ0 223 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 HAPLN2Q9GZV7 340 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 CXCL16Q9H2A7 254 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 TSHZ2Q9NRE2 1034 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 ANKFY1Q9P2R3 1169 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 DNAJB4Q9UDY4 337 aa22.98■■□□□ 1.27
MAP1LC3A-202ENST00000374837 FNDC1Q4ZHG4 1894 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms