RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 FIGNQ5HY92 759 aa12.87□□□□□ -0.35
TMEM38B-202ENST00000374692 NOP9Q86U38 636 aaKnown RBP12.87□□□□□ -0.35
TMEM38B-202ENST00000374692 C4orf19Q8IY42 314 aa12.87□□□□□ -0.35
TMEM38B-202ENST00000374692 KRT35Q92764 455 aa12.87□□□□□ -0.35
TMEM38B-202ENST00000374692 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
TMEM38B-202ENST00000374692 CPA4Q9UI42 421 aa12.87□□□□□ -0.35
TMEM38B-202ENST00000374692 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 OATP04181 439 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 SFNP31947 248 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 GPS2Q13227 327 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 NAB2Q15742 525 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 WDR44Q5JSH3 913 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 BEND6Q5SZJ8 279 aaPredicted RBP12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 SYCP2LQ5T4T6 812 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 CCDC151A5D8V7 595 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 EIF3DO15371 548 aaKnown RBP eCLIP12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 EDN1P05305 212 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 GLRA2P23416 452 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 GGCXP38435 758 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 UBLCP1Q8WVY7 318 aaPredicted RBP12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 KREMEN1Q96MU8 473 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 AGPAT1Q99943 283 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 STK33Q9BYT3 514 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
TMEM38B-202ENST00000374692 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 RAD51CO43502 376 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 ZEB2O60315 1214 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 DGAT1O75907 488 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 KRT14P02533 472 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 TCP1P17987 556 aaKnown RBP12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PDE6CP51160 858 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 AMHR2Q16671 573 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 GLRA4Q5JXX5 417 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 KRT39Q6A163 491 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 RAB20Q9NX57 234 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PTPRJQ12913 1337 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 TTI1O43156 1089 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 THAP12O43422 761 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 CCL15Q16663 113 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PRUNE1Q86TP1 453 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 TMEM192Q8IY95 271 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 FBXL13Q8NEE6 735 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PCDHB18PQ96TA0 734 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 NOC2LQ9Y3T9 749 aaKnown RBP12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 CDH8P55286 799 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 ASTE1Q2TB18 679 aaPredicted RBP12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 PARD3BQ8TEW8 1205 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 HES2Q9Y543 173 aa12.85□□□□□ -0.35
TMEM38B-202ENST00000374692 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 KIF4AO95239 1232 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 LBX2Q6XYB7 198 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 GPRASP2Q96D09 838 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 RNPEPQ9H4A4 650 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 AIPL1Q9NZN9 384 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 COG5Q9UP83 839 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 DAPK3O43293 454 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 CAPN2P17655 700 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 TRPC3Q13507 836 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ABHD15Q6UXT9 468 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 TPCN2Q8NHX9 752 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 GOLGA5Q8TBA6 731 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 NLRP7Q8WX94 980 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ANAPC7Q9UJX3 599 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ZBTB22O15209 634 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ZNF131P52739 623 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 DYNLT1P63172 113 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ZNF568Q3ZCX4 644 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ERO1BQ86YB8 467 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 SNX24Q9Y343 169 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 QSER1Q2KHR3 1735 aa12.84□□□□□ -0.35
TMEM38B-202ENST00000374692 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.83□□□□□ -0.36
TMEM38B-202ENST00000374692 GSTTP1A0A1W2PQM5 241 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms