RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TRIM6Q9C030 488 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 CDT1Q9H211 546 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 RC3H2Q9HBD1 1191 aaKnown RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 INSL6Q9Y581 213 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 PCDHA11Q9Y5I1 949 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 LAMA2P24043 3122 aaKnown RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 ZMYM2Q9UBW7 1377 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 A0A0B4J269 797 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 INPPL1O15357 1258 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 ITGA4P13612 1032 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 GARTP22102 1010 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
HSPG2-202ENST00000374676 CAMK4Q16566 473 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 KYAT1Q16773 422 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 ZNF568Q3ZCX4 644 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 COBLL1Q53SF7 1204 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 ZNF658Q5TYW1 1059 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-202ENST00000374676 FAM117BQ6P1L5 589 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 AGMOQ6ZNB7 445 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 TMCO2Q7Z6W1 182 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-202ENST00000374676 GUF1Q8N442 669 aaKnown RBP12.43□□□□□ -0.42
HSPG2-202ENST00000374676 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-202ENST00000374676 HAPLN2Q9GZV7 340 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 GBP3Q9H0R5 595 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 CGNQ9P2M7 1197 aaKnown RBP12.43□□□□□ -0.42
HSPG2-202ENST00000374676 MAN1B1Q9UKM7 699 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 GDAQ9Y2T3 454 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
HSPG2-202ENST00000374676 CHD9Q3L8U1 2897 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 KIAA0391O15091 583 aaKnown RBP12.42□□□□□ -0.42
HSPG2-202ENST00000374676 OGTO15294 1046 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 TGFB1I1O43294 461 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 TLL1O43897 1013 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 OFD1O75665 1012 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 ADSSP30520 456 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 GRM5P41594 1212 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
HSPG2-202ENST00000374676 MORC3Q14149 939 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 RAB30Q15771 203 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
HSPG2-202ENST00000374676 ZBTB33Q86T24 672 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 CMTR2Q8IYT2 770 aaKnown RBP12.42□□□□□ -0.42
HSPG2-202ENST00000374676 TRIML1Q8N9V2 468 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 GOLGA5Q8TBA6 731 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 TMEM174Q8WUU8 243 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 LPPQ93052 612 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 IKZF4Q9H2S9 585 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 NXF3Q9H4D5 531 aaKnown RBP12.42□□□□□ -0.42
HSPG2-202ENST00000374676 RSAD1Q9HA92 442 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 SNTG2Q9NY99 539 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 ANKFY1Q9P2R3 1169 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 MSRAQ9UJ68 235 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 HES2Q9Y543 173 aa12.42□□□□□ -0.42
HSPG2-202ENST00000374676 TDRD15B5MCY1 1934 aaKnown RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 MEIS3P2A8K0S8 358 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 TISP43B9A030 160 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 PDXKO00764 312 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 FAM189A1O60320 539 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 FGFR1P11362 822 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 MATR3P43243 847 aaKnown RBP eCLIP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 RABGGTBP53611 331 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 CLLU1OSQ5K130 101 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 RBM43Q6ZSC3 357 aaKnown RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 C12orf56Q8IXR9 622 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 HELQQ8TDG4 1101 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 YME1L1Q96TA2 773 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 KCTD10Q9H3F6 313 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 TYW1Q9NV66 732 aaKnown RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 AGO2Q9UKV8 859 aaKnown RBP12.41□□□□□ -0.42
HSPG2-202ENST00000374676 COL4A6Q14031 1691 aa12.41□□□□□ -0.42
HSPG2-202ENST00000374676 TBKBP1A7MCY6 615 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 CLTAP09496 248 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 HARSP12081 509 aaKnown RBP12.4□□□□□ -0.42
HSPG2-202ENST00000374676 BMP6P22004 513 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 AKAP5P24588 427 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 PBX2P40425 430 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 PPP1R2P41236 205 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 PRCPP42785 496 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-202ENST00000374676 MYBPC2Q14324 1141 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 XKR4Q5GH76 650 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 HABP4Q5JVS0 413 aaKnown RBP12.4□□□□□ -0.42
HSPG2-202ENST00000374676 ALKAL1Q6UXT8 129 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 THNSL1Q8IYQ7 743 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms