RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ENOSF1Q7L5Y1 443 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 ALS2CR12Q96Q35 445 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 OSBPL9Q96SU4 736 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 MMS19Q96T76 1030 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRPF4-202ENST00000374199 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
PRPF4-202ENST00000374199 FOXN3O00409 490 aaPredicted RBP13.62□□□□□ -0.23
PRPF4-202ENST00000374199 LRRN2O75325 713 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 MCL1Q07820 350 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 FZD8Q9H461 694 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 ENC1O14682 589 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 CYP2C8P10632 490 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 GCLMP48507 274 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 CKAP4Q07065 602 aaKnown RBP13.61□□□□□ -0.23
PRPF4-202ENST00000374199 MXD4Q14582 209 aaPredicted RBP13.61□□□□□ -0.23
PRPF4-202ENST00000374199 BRD3Q15059 726 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
PRPF4-202ENST00000374199 TCP11Q8WWU5 503 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 HYOU1Q9Y4L1 999 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 PTPRJQ12913 1337 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 C22orf31O95567 290 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 SNAI1O95863 264 aaPredicted RBP13.61□□□□□ -0.23
PRPF4-202ENST00000374199 CCNA1P78396 465 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 TSHZ1Q6ZSZ6 1077 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 FBXO16Q8IX29 292 aaPredicted RBP13.61□□□□□ -0.23
PRPF4-202ENST00000374199 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 TPCN2Q8NHX9 752 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 EPS8L1Q8TE68 723 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 USP6NLQ92738 828 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 TMEM143Q96AN5 459 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
PRPF4-202ENST00000374199 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 GZMAP12544 262 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 TNFRSF8P28908 595 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 CETN1Q12798 172 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 DRP2Q13474 957 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 TTLL4Q14679 1199 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 USP37Q86T82 979 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 SAAL1Q96ER3 474 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 TTC7AQ9ULT0 858 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 CTAGE15A4D2H0 777 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 VNN1O95497 513 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 CTAGE8P0CG41 777 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 LAMC2Q13753 1193 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 KIAA0753Q2KHM9 967 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 MORN1Q5T089 497 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 TMEM63BQ5T3F8 832 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 CTAGE6Q86UF2 777 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 CTAGE4Q8IX94 777 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 RASGEF1CQ8N431 466 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 PNKPQ96T60 521 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 AGPAT1Q99943 283 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 ADORA2AP29274 412 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 COG1Q8WTW3 980 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 HES6Q96HZ4 224 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
PRPF4-202ENST00000374199 C16orf70Q9BSU1 422 aa13.6□□□□□ -0.23
PRPF4-202ENST00000374199 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 MAP2K7O14733 419 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 HBP1O60381 514 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 PALMO75781 387 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 ITGBL1O95965 494 aaPredicted RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 ACO1P21399 889 aaKnown RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 NLRP11P59045 1033 aaKnown RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 LAMTOR4Q0VGL1 99 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 CST9Q5W186 159 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 POMGNT1Q8WZA1 660 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 CGRRF1Q99675 332 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 JPH2Q9BR39 696 aaPredicted RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 PDGFCQ9NRA1 345 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 ZNF484Q5JVG2 852 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 VPS36Q86VN1 386 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 PRPF31Q8WWY3 499 aaKnown RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 FAXDC2Q96IV6 333 aa13.59□□□□□ -0.23
PRPF4-202ENST00000374199 SUCLA2Q9P2R7 463 aaPredicted RBP13.59□□□□□ -0.23
PRPF4-202ENST00000374199 CCL15-CCL14A0A0B4J2E2 113 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 SRGAP2O75044 1071 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 HOXC6P09630 235 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 ZNF132P52740 706 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 AP3M2P53677 418 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.23
PRPF4-202ENST00000374199 CCL15Q16663 113 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 AMHR2Q16671 573 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 EAPPQ56P03 285 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms