RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 NDNQ99608 321 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 SH2D4AQ9H788 454 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 RNF14Q9UBS8 474 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 LRWD1Q9UFC0 647 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 TSKSQ9UJT2 592 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ZNF180Q9UJW8 692 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 COL2A1P02458 1487 aaPredicted RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 FOXN3O00409 490 aaPredicted RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 UFL1O94874 794 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 FBXO21O94952 628 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 PSMA3P25788 255 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 TNFRSF8P28908 595 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 EPHB4P54760 987 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 POU5F1BQ06416 359 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 GRIK5Q16478 980 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 BCL2A1Q16548 175 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CCDC14Q49A88 953 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ZCWPW2Q504Y3 356 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 EMBQ6PCB8 327 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 PPP4R3CPQ6ZMV5 832 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 EXOC3L1Q86VI1 746 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CREG2Q8IUH2 290 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CCDC17Q96LX7 622 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 PIGSQ96S52 555 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 HNRNPABQ99729 332 aaKnown RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 SEMA6BQ9H3T3 888 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 VCX3AQ9NNX9 186 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 IL20Q9NYY1 176 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 HYOU1Q9Y4L1 999 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CCDC162PA2VCL2 907 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 H0YC42 278 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 PAHP00439 452 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 EPB41P11171 864 aaKnown RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 POLD2P49005 469 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 IRAK1P51617 712 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 TPD52P55327 224 aaPredicted RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 PDE1BQ01064 536 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 SULT2A1Q06520 285 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ZNF543Q08ER8 600 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 GPR162Q16538 588 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 KRT79Q5XKE5 535 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ALS2CLQ60I27 953 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 HHIPL2Q6UWX4 724 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ZNF365Q70YC5 407 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 SND1Q7KZF4 910 aaKnown RBP eCLIP8.8□□□□□ -1
GARNL3-201ENST00000373386 HS6ST3Q8IZP7 471 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 SLC44A5Q8NCS7 719 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CCHCR1Q8TD31 782 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 GDAP1L1Q96MZ0 367 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 TSG101Q99816 390 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 SH3GL2Q99962 352 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 IFIH1Q9BYX4 1025 aaKnown RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 NDST4Q9H3R1 872 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 CASS4Q9NQ75 786 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 POLG2Q9UHN1 485 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ATF5Q9Y2D1 282 aaPredicted RBP8.8□□□□□ -1
GARNL3-201ENST00000373386 ASB3Q9Y575 518 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 PCDHGB3Q9Y5G1 929 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 MYH4Q9Y623 1939 aa8.8□□□□□ -1
GARNL3-201ENST00000373386 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 PITPNM2Q9BZ72 1349 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 EDIL3O43854 480 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 ANXA13P27216 316 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 TECP42680 631 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 KLK7P49862 253 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 GJA9P57773 515 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 AP2B1P63010 937 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 CYP27A1Q02318 531 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 TRIM71Q2Q1W2 868 aaKnown RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 MFSD14BQ5SR56 506 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 TWF2Q6IBS0 349 aaKnown RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 USP17L2Q6R6M4 530 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 LRRC55Q6ZSA7 311 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 SESTD1Q86VW0 696 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 ERICH1Q86X53 443 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 SLAIN1Q8ND83 568 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 GLMNQ92990 594 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 ACTR5Q9H9F9 607 aaPredicted RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 PARVBQ9HBI1 364 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 NDFIP2Q9NV92 336 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 ATPIF1Q9UII2 106 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 DAGLAQ9Y4D2 1042 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 MYH7BA7E2Y1 1941 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 USP17L5A8MUK1 530 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 TBX3O15119 743 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 EIF3HO15372 352 aaKnown RBP eCLIP8.79□□□□□ -1
GARNL3-201ENST00000373386 CETN2P41208 172 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 GEMIN4P57678 1058 aaKnown RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 MYO1EQ12965 1108 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 NNTQ13423 1086 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 SIM2Q14190 667 aaPredicted RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 ASTE1Q2TB18 679 aaPredicted RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 GLE1Q53GS7 698 aaKnown RBP8.79□□□□□ -1
GARNL3-201ENST00000373386 TMTC4Q5T4D3 741 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 FAM228AQ86W67 206 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 AMIGO3Q86WK7 504 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 FAM20CQ8IXL6 584 aa8.79□□□□□ -1
GARNL3-201ENST00000373386 LSMEM2Q8N112 164 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms