RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TMEM132BQ14DG7 1078 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 TAS1R3Q7RTX0 852 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 CARD9Q9H257 536 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 VPS33BQ9H267 617 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 ZNF214Q9UL59 606 aaPredicted RBP25.66■■□□□ 1.7
CDK9-201ENST00000373264 SFNP31947 248 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 ZNF844Q08AG5 666 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 CYFIP1Q7L576 1253 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 CCDC26Q8TAB7 109 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 TMEM174Q8WUU8 243 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 SEPT9Q9UHD8 586 aaPredicted RBP25.66■■□□□ 1.7
CDK9-201ENST00000373264 TTC7AQ9ULT0 858 aaPredicted RBP25.66■■□□□ 1.7
CDK9-201ENST00000373264 PTPRAP18433 802 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 CCND2P30279 289 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 CTNNA1P35221 906 aaKnown RBP25.65■■□□□ 1.7
CDK9-201ENST00000373264 SMTNP53814 917 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 PTENP60484 403 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 PRKG1Q13976 671 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 C2CD6Q53TS8 623 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 UBAP2Q5T6F2 1119 aaKnown RBP25.65■■□□□ 1.7
CDK9-201ENST00000373264 KRT39Q6A163 491 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 CD302Q8IX05 232 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 SHC3Q92529 594 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 ATP6V1G3Q96LB4 118 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 FAM213AQ9BRX8 229 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 RLFQ13129 1914 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 RTN2O75298 545 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 CYP11B1P15538 503 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 SKOR1P84550 965 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 LLGL2Q6P1M3 1020 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 DLK2Q6UY11 383 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 SV2AQ7L0J3 742 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 RHOT2Q8IXI1 618 aa25.65■■□□□ 1.7
CDK9-201ENST00000373264 MYO1FO00160 1098 aa25.64■■□□□ 1.7
CDK9-201ENST00000373264 HNRNPDLO14979 420 aaKnown RBP25.64■■□□□ 1.7
CDK9-201ENST00000373264 NR1D1P20393 614 aa25.64■■□□□ 1.7
CDK9-201ENST00000373264 DR1Q01658 176 aa25.64■■□□□ 1.7
CDK9-201ENST00000373264 SP2Q02086 613 aa25.64■■□□□ 1.7
CDK9-201ENST00000373264 DHX9Q08211 1270 aaKnown RBP25.64■■□□□ 1.7
CDK9-201ENST00000373264 TMC3Q7Z5M5 1100 aa25.64■■□□□ 1.7
CDK9-201ENST00000373264 FEZ2Q9UHY8 353 aaPredicted RBP25.64■■□□□ 1.7
CDK9-201ENST00000373264 TRPC6Q9Y210 931 aa25.64■■□□□ 1.7
CDK9-201ENST00000373264 UTP11Q9Y3A2 253 aaKnown RBP25.64■■□□□ 1.7
CDK9-201ENST00000373264 DCDC2CA8MYV0 355 aa25.64■■□□□ 1.69
CDK9-201ENST00000373264 PYGMP11217 842 aa25.64■■□□□ 1.69
CDK9-201ENST00000373264 TTC27Q6P3X3 843 aa25.64■■□□□ 1.69
CDK9-201ENST00000373264 ZNF280CQ8ND82 737 aa25.64■■□□□ 1.69
CDK9-201ENST00000373264 NUP85Q9BW27 656 aa25.64■■□□□ 1.69
CDK9-201ENST00000373264 TMBIM4Q9HC24 238 aa25.64■■□□□ 1.69
CDK9-201ENST00000373264 MAP3K20Q9NYL2 800 aaKnown RBP25.64■■□□□ 1.69
CDK9-201ENST00000373264 SCYL3Q8IZE3 742 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 SEC14L1Q92503 715 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 ZSWIM1Q9BR11 485 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 TRIM7Q9C029 511 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 BCCIPQ9P287 314 aaKnown RBP eCLIP25.63■■□□□ 1.69
CDK9-201ENST00000373264 SNX24Q9Y343 169 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 PRKCEQ02156 737 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 CYP24A1Q07973 514 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 SCARA3Q6AZY7 606 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 PRELID2Q8N945 189 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 ZNF516Q92618 1163 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 A1CFQ9NQ94 594 aaKnown RBP25.63■■□□□ 1.69
CDK9-201ENST00000373264 RAB20Q9NX57 234 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 ATP8A1Q9Y2Q0 1164 aa25.63■■□□□ 1.69
CDK9-201ENST00000373264 SSTR3P32745 418 aaPredicted RBP25.62■■□□□ 1.69
CDK9-201ENST00000373264 PEX5P50542 639 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 MFAP3P55082 362 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 MTERF2Q49AM1 385 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 ZNF653Q96CK0 615 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 TMEM8AQ9HCN3 771 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 EXOC7Q9UPT5 735 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 MAPK13O15264 365 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 KRT5P13647 590 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 ANGEL2Q5VTE6 544 aaKnown RBP25.62■■□□□ 1.69
CDK9-201ENST00000373264 KDM7AQ6ZMT4 941 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 FBXL13Q8NEE6 735 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 DDX1Q92499 740 aaKnown RBP25.62■■□□□ 1.69
CDK9-201ENST00000373264 BICD1Q96G01 975 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 IWS1Q96ST2 819 aa25.62■■□□□ 1.69
CDK9-201ENST00000373264 GRIN3BO60391 1043 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 SEC24CP53992 1094 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 ACTR2P61160 394 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 DAB2IPQ5VWQ8 1189 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 C11orf63Q6NUN7 778 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 FMNL3Q8IVF7 1028 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 ZNF564Q8TBZ8 553 aaPredicted RBP25.61■■□□□ 1.69
CDK9-201ENST00000373264 TMEM143Q96AN5 459 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 MFSD14AQ96MC6 490 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 TIPINQ9BVW5 301 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 JPH1Q9HDC5 661 aaPredicted RBP25.61■■□□□ 1.69
CDK9-201ENST00000373264 CYP39A1Q9NYL5 469 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 SPOPLQ6IQ16 392 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 JAMLQ86YT9 394 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 GPRASP2Q96D09 838 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 POLR3FQ9H1D9 316 aaPredicted RBP25.61■■□□□ 1.69
CDK9-201ENST00000373264 PDLIM7Q9NR12 457 aa25.61■■□□□ 1.69
CDK9-201ENST00000373264 DSG3P32926 999 aa25.6■■□□□ 1.69
CDK9-201ENST00000373264 GPC3P51654 580 aa25.6■■□□□ 1.69
CDK9-201ENST00000373264 HADHBP55084 474 aaKnown RBP25.6■■□□□ 1.69
CDK9-201ENST00000373264 DUPD1Q68J44 220 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms