RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 HSD17B4P51659 736 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 PODNQ7Z5L7 613 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 PIGBQ92521 554 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 RMDN1Q96DB5 314 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 NEO1Q92859 1461 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 MMP10P09238 476 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 BLVRAP53004 296 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 SYDE1Q6ZW31 735 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 NLRP14Q86W24 1093 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 RUBCNQ92622 972 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 SPATA33Q96N06 139 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 GPR101Q96P66 508 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 SENP1Q9P0U3 644 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 DFFAO00273 331 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 C21orf2O43822 256 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ECE2O60344 883 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 EFNA5P52803 228 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 SLFNL1Q499Z3 407 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ATP6V1G3Q96LB4 118 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 SELENONQ9NZV5 590 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 USP6P35125 1406 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ERBB3P21860 1342 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 GNL1P36915 607 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 INPP5AQ14642 412 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 KCNV1Q6PIU1 500 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 GUF1Q8N442 669 aaKnown RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 SLC13A1Q9BZW2 595 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 APOA1P02647 267 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 SERPINB10P48595 397 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 STAT4Q14765 748 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 DUOXA2Q1HG44 320 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
VCL-202ENST00000372755 LXNQ9BS40 222 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 MROH7-TTC4A0A0A0MT08 1334 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 ASB14A6NK59 587 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 FCER1AP12319 257 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 CDH6P55285 790 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 NFRKBQ6P4R8 1299 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 RNF135Q8IUD6 432 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 YAF2Q8IY57 180 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 SAAL1Q96ER3 474 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 PLEKHA5Q9HAU0 1116 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 F5H423 210 aaPredicted RBP12.19□□□□□ -0.46
VCL-202ENST00000372755 CYBBP04839 570 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 FRMD5Q7Z6J6 570 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 AGO2Q9UKV8 859 aaKnown RBP12.19□□□□□ -0.46
VCL-202ENST00000372755 EFCAB6Q5THR3 1501 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 PCYT1AP49585 367 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 USP11P51784 963 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 CUL3Q13618 768 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 GTF2H3Q13889 308 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 TOB2Q14106 344 aaPredicted RBP12.19□□□□□ -0.46
VCL-202ENST00000372755 LRRC8BQ6P9F7 803 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 PID1Q7Z2X4 250 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 MFN1Q8IWA4 741 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 TIPINQ9BVW5 301 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
VCL-202ENST00000372755 SUPT3HO75486 399 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 CACNB3P54284 484 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 GPSM2P81274 684 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 LAMB3Q13751 1172 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 DDX47Q9H0S4 455 aaKnown RBP12.19□□□□□ -0.46
VCL-202ENST00000372755 ETNK1Q9HBU6 452 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 MAD2L2Q9UI95 211 aa12.19□□□□□ -0.46
VCL-202ENST00000372755 SYNMO15061 1565 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HNRNPH2P55795 449 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 SIK2Q9H0K1 926 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 A0A1W2PQC6 194 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ANGPT2O15123 496 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 NCK2O43639 380 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ACTR2P61160 394 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 STILQ15468 1287 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 TDRD3Q9H7E2 651 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 CYP4F11Q9HBI6 524 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 HSPA9P38646 679 aaKnown RBP12.18□□□□□ -0.46
VCL-202ENST00000372755 NCAPHQ15003 741 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 ANKRD40Q6AI12 368 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
VCL-202ENST00000372755 CYB5R4Q7L1T6 521 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms