RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PROZP22891 400 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 PSMD2Q13200 908 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 PNOCQ13519 176 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 ZNF568Q3ZCX4 644 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 MPZL3Q6UWV2 235 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 ABI1Q8IZP0 508 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 SP7Q8TDD2 431 aaPredicted RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 LPPQ93052 612 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 TIFAQ96CG3 184 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 TSPY26PQ9H489 355 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 RC3H2Q9HBD1 1191 aaKnown RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 EXOC7Q9UPT5 735 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 EIF3DO15371 548 aaKnown RBP eCLIP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 CA3P07451 260 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 GATMP50440 423 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 CMTR2Q8IYT2 770 aaKnown RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 GLIS3Q8NEA6 775 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 RSPH1Q8WYR4 309 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 ANP32BQ92688 251 aaKnown RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 LRCH3Q96II8 777 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 ZBTB45Q96K62 511 aaPredicted RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 TMEM117Q9H0C3 514 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 CDT1Q9H211 546 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 NKX2-4Q9H2Z4 354 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 SLC39A2Q9NP94 309 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 ANKFY1Q9P2R3 1169 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 HES2Q9Y543 173 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 GBF1Q92538 1859 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 LCHNA4D1U4 455 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 ABLIM1O14639 778 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 CLDN3O15551 220 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 PRPF6O94906 941 aaKnown RBP17.43■□□□□ 0.38
PFDN4-201ENST00000371419 RHOBTB3O94955 611 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 SMC2O95347 1197 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 MCF2P10911 925 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 KCNA1Q09470 495 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
PFDN4-201ENST00000371419 KCNB1Q14721 858 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 GLB1LQ6UWU2 654 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 AGMOQ6ZNB7 445 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 EPM2AIP1Q7L775 607 aaPredicted RBP17.43■□□□□ 0.38
PFDN4-201ENST00000371419 ZBTB33Q86T24 672 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 SYCP3Q8IZU3 236 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 HELQQ8TDG4 1101 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 APOL6Q9BWW8 343 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 TMEM206Q9H813 350 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 RSAD1Q9HA92 442 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 SLC28A3Q9HAS3 691 aa17.43■□□□□ 0.38
PFDN4-201ENST00000371419 MATR3P43243 847 aaKnown RBP eCLIP17.42■□□□□ 0.38
PFDN4-201ENST00000371419 MCL1Q07820 350 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 STK4Q13043 487 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
PFDN4-201ENST00000371419 PAN2Q504Q3 1202 aaKnown RBP17.42■□□□□ 0.38
PFDN4-201ENST00000371419 SLC39A4Q6P5W5 647 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 FIBCD1Q8N539 461 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 ZNF507Q8TCN5 953 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 CASD1Q96PB1 797 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 RMND1Q9NWS8 449 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 UBE4BO95155 1302 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 COL4A6Q14031 1691 aa17.42■□□□□ 0.38
PFDN4-201ENST00000371419 LINC01553A4QN01 128 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 OFD1O75665 1012 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 HARSP12081 509 aaKnown RBP17.41■□□□□ 0.38
PFDN4-201ENST00000371419 AKAP5P24588 427 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 PPP2R2DQ66LE6 453 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 SLFN12LQ6IEE8 588 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 SPATA20Q8TB22 786 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 SCFD1Q8WVM8 642 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 GSDMAQ96QA5 445 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 NUP62CLQ9H1M0 184 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 PARP2Q9UGN5 583 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 GIT1Q9Y2X7 761 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
PFDN4-201ENST00000371419 CHD9Q3L8U1 2897 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 TMEM265A0A087WTH1 108 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 A0A0B4J269 797 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 ANKRD63C9JTQ0 380 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 GRM5P41594 1212 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 FXR1P51114 621 aaKnown RBP eCLIP17.4■□□□□ 0.38
PFDN4-201ENST00000371419 TAP1Q03518 808 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 BMT2Q1RMZ1 405 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 NOMO2Q5JPE7 1267 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 GPR153Q6NV75 609 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 KIAA0895Q8NCT3 520 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 ERCC4Q92889 916 aaPredicted RBP17.4■□□□□ 0.38
PFDN4-201ENST00000371419 CCDC94Q9BW85 323 aaPredicted RBP17.4■□□□□ 0.38
PFDN4-201ENST00000371419 MRPL9Q9BYD2 267 aaKnown RBP17.4■□□□□ 0.38
PFDN4-201ENST00000371419 HAPLN2Q9GZV7 340 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 IKZF4Q9H2S9 585 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 INPP5FQ9Y2H2 1132 aa17.4■□□□□ 0.38
PFDN4-201ENST00000371419 GDAQ9Y2T3 454 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms