RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 LIFRP42702 1097 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 PPP6R3Q5H9R7 873 aaPredicted RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 ODR4Q5SWX8 454 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 CCT6BQ92526 530 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 PRPF18Q99633 342 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 MRPL1Q9BYD6 325 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 DRC3Q9H069 523 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 CDC42EP4Q9H3Q1 356 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 DCLRE1BQ9H816 532 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 TYW1Q9NV66 732 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 ADA2Q9NZK5 511 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 EFCAB6Q5THR3 1501 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 SYNJ2BP-COX16A0A087WUM0 186 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 CCDC78A2IDD5 438 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 POTEFA5A3E0 1075 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 OATP04181 439 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 MCF2P10911 925 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 CIITAP33076 1130 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ITGA8P53708 1063 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 MYL7Q01449 175 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 TCP10Q12799 353 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 BLMHQ13867 455 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 NAB2Q15742 525 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 POTEGQ6S5H5 508 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 POTEEQ6S8J3 1075 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 RINLQ6ZS11 566 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 TMEM110Q86TL2 294 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 SFR1Q86XK3 245 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 FITM2Q8N6M3 262 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 CLPTM1LQ96KA5 538 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 CFAP57Q96MR6 1250 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ORAI2Q96SN7 254 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 COX16Q9P0S2 106 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 EDC4Q6P2E9 1401 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 ABCA9Q8IUA7 1624 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 MYMKA6NI61 221 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 H7C0C1 242 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 RIMBP2O15034 1052 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ENO3P13929 434 aaPredicted RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 KRT4P19013 534 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 LMNB1P20700 586 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 PHBP35232 272 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ATP5OP48047 213 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 PSMD7P51665 324 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ATP2C1P98194 919 aaPredicted RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 PPIDQ08752 370 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 TBL3Q12788 808 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 XRCC4Q13426 336 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 SH3RF1Q7Z6J0 888 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 PRPF39Q86UA1 669 aaKnown RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 RBBP8NLQ8NC74 664 aaPredicted RBP8.2□□□□□ -1.1
UFL1-201ENST00000369278 CCDC138Q96M89 665 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 TSSK1BQ9BXA7 367 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 ZWILCHQ9H900 591 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 SLC52A2Q9HAB3 445 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 LRCH1Q9Y2L9 728 aa8.2□□□□□ -1.1
UFL1-201ENST00000369278 RIMBP3CA6NJZ7 1639 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 RIMBP3BA6NNM3 1639 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 RIMBP3Q9UFD9 1639 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 POGZQ7Z3K3 1410 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 MYO3BQ8WXR4 1341 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 ARHGEF35A5YM69 484 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 COPEO14579 308 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 LPXNO60711 386 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 CLPTM1O96005 669 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 PLA2G4BP0C869 781 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 DSG1Q02413 1049 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 R3HDM1Q15032 1099 aaKnown RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 LAYNQ6UX15 382 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 SLC30A10Q6XR72 485 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 RNF169Q8NCN4 708 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 IP6K1Q92551 441 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 DACT3Q96B18 629 aaPredicted RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 DTNBP1Q96EV8 351 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 SCYL1Q96KG9 808 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 SLITRK6Q9H5Y7 841 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 FBXO6Q9NRD1 293 aaPredicted RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 RAB20Q9NX57 234 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 STRIP2Q9ULQ0 834 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 PDS5AQ29RF7 1337 aaKnown RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 LAMA4Q16363 1823 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 RNF103-CHMP3A0A140T963 221 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 ZMPSTE24O75844 475 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 ATP5HO75947 161 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 DDHD2O94830 711 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 TUFMP49411 452 aaKnown RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 USP11P51784 963 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 POLGP54098 1239 aaPredicted RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 HIRAP54198 1017 aaPredicted RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 COASYQ13057 564 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 SLC12A1Q13621 1099 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 HIC1Q14526 733 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 OASLQ15646 514 aaKnown RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 HABP4Q5JVS0 413 aaKnown RBP8.19□□□□□ -1.1
UFL1-201ENST00000369278 ERMARDQ5T6L9 678 aa8.19□□□□□ -1.1
UFL1-201ENST00000369278 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms