RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 FOXD4L5Q5VV16 416 aaPredicted RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 EEF1DP3Q658K8 133 aa26.32■■□□□ 1.8
PFDN2-201ENST00000368010 USP49Q70CQ1 688 aa26.32■■□□□ 1.8
PFDN2-201ENST00000368010 APBB1IPQ7Z5R6 666 aaPredicted RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 KRI1Q8N9T8 703 aaKnown RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 FOXD4L4Q8WXT5 416 aaPredicted RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 NTPCRQ9BSD7 190 aaKnown RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 MRPL4Q9BYD3 311 aaKnown RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 NPHP3-ACAD11A0A0J9YXS1 232 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 SLC16A4O15374 487 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 ALDH2P05091 517 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 MCM6Q14566 821 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 BMS1Q14692 1282 aaKnown RBP26.31■■□□□ 1.8
PFDN2-201ENST00000368010 EFHBQ8N7U6 833 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 LARP4BQ92615 738 aaKnown RBP26.31■■□□□ 1.8
PFDN2-201ENST00000368010 RPS6KC1Q96S38 1066 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 REEP2Q9BRK0 252 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 KLK14Q9P0G3 267 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 LARSQ9P2J5 1176 aaKnown RBP26.31■■□□□ 1.8
PFDN2-201ENST00000368010 TNFSF13BQ9Y275 285 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 FAN1Q9Y2M0 1017 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 BRWD1Q9NSI6 2320 aa26.31■■□□□ 1.8
PFDN2-201ENST00000368010 A0A0C4DFX4 3053 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 FSD2A1L4K1 749 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 LINC01565O15544 149 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 KRT18P05783 430 aaKnown RBP26.3■■□□□ 1.8
PFDN2-201ENST00000368010 ADAM15Q13444 863 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 SMC1AQ14683 1233 aaKnown RBP26.3■■□□□ 1.8
PFDN2-201ENST00000368010 LINC00301Q8NCQ3 95 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 BCL7CQ8WUZ0 217 aaPredicted RBP26.3■■□□□ 1.8
PFDN2-201ENST00000368010 UHRF1Q96T88 793 aaPredicted RBP26.3■■□□□ 1.8
PFDN2-201ENST00000368010 CDCA3Q99618 268 aaPredicted RBP26.3■■□□□ 1.8
PFDN2-201ENST00000368010 MIOSQ9NXC5 875 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 SNTG2Q9NY99 539 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 STK17AQ9UEE5 414 aa26.3■■□□□ 1.8
PFDN2-201ENST00000368010 NRP1O14786 923 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 NR1I2O75469 434 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 F13A1P00488 732 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 DDIT3P35638 169 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 LTBRP36941 435 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 NDUFV1P49821 464 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 DSC1Q08554 894 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 GRIK3Q13003 919 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 STRN3Q13033 797 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 DUSP6Q16828 381 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 PUS10Q3MIT2 529 aaKnown RBP26.29■■□□□ 1.8
PFDN2-201ENST00000368010 TAS1R3Q7RTX0 852 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 DDX53Q86TM3 631 aaKnown RBP26.29■■□□□ 1.8
PFDN2-201ENST00000368010 COLGALT2Q8IYK4 626 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 VPS52Q8N1B4 723 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 GSTCDQ8NEC7 633 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.29■■□□□ 1.8
PFDN2-201ENST00000368010 STK39Q9UEW8 545 aa26.29■■□□□ 1.8
PFDN2-201ENST00000368010 H0YCG3 227 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 PER2O15055 1255 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 TBX10O75333 385 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 RECQL4O94761 1208 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 FAM13AO94988 1023 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 OR1G1P47890 313 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 ZNF568Q3ZCX4 644 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 RRAGBQ5VZM2 374 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 PTCRAQ6ISU1 281 aaPredicted RBP26.28■■□□□ 1.8
PFDN2-201ENST00000368010 TMEM161BQ8NDZ6 487 aa26.28■■□□□ 1.8
PFDN2-201ENST00000368010 ACO2Q99798 780 aaKnown RBP26.28■■□□□ 1.8
PFDN2-201ENST00000368010 TARS2Q9BW92 718 aaKnown RBP26.28■■□□□ 1.8
PFDN2-201ENST00000368010 TFIP11Q9UBB9 837 aaKnown RBP26.28■■□□□ 1.8
PFDN2-201ENST00000368010 PRG3Q9Y2Y8 225 aaPredicted RBP26.28■■□□□ 1.8
PFDN2-201ENST00000368010 SPTBN5Q9NRC6 3674 aaKnown RBP26.27■■□□□ 1.8
PFDN2-201ENST00000368010 HIDE1A8MVS5 230 aa26.27■■□□□ 1.8
PFDN2-201ENST00000368010 SPTLC2O15270 562 aa26.27■■□□□ 1.8
PFDN2-201ENST00000368010 TBCAO75347 108 aaKnown RBP26.27■■□□□ 1.8
PFDN2-201ENST00000368010 YEATS4O95619 227 aa26.27■■□□□ 1.8
PFDN2-201ENST00000368010 CA8P35219 290 aa26.27■■□□□ 1.8
PFDN2-201ENST00000368010 DLX2Q07687 328 aaPredicted RBP26.27■■□□□ 1.8
PFDN2-201ENST00000368010 MRPL43Q8N983 215 aaKnown RBP26.27■■□□□ 1.8
PFDN2-201ENST00000368010 ZBP1Q9H171 429 aa26.27■■□□□ 1.8
PFDN2-201ENST00000368010 PARVGQ9HBI0 331 aa26.27■■□□□ 1.8
PFDN2-201ENST00000368010 PPP6R2O75170 966 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 MAPTP10636 758 aaKnown RBP26.26■■□□□ 1.79
PFDN2-201ENST00000368010 NCKAP1LP55160 1127 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 PKP1Q13835 747 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 GIT2Q14161 759 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 CCDC73Q6ZRK6 1079 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 TCHPQ9BT92 498 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 CDT1Q9H211 546 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 ZHX3Q9H4I2 956 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 PTPRHQ9HD43 1115 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 FAM50BQ9Y247 325 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 GDAQ9Y2T3 454 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 XIRP2A4UGR9 3374 aa26.26■■□□□ 1.79
PFDN2-201ENST00000368010 C2orf71A6NGG8 1288 aa26.25■■□□□ 1.79
PFDN2-201ENST00000368010 CXCL14O95715 111 aa26.25■■□□□ 1.79
PFDN2-201ENST00000368010 CTSAP10619 480 aa26.25■■□□□ 1.79
PFDN2-201ENST00000368010 ZNF131P52739 623 aa26.25■■□□□ 1.79
PFDN2-201ENST00000368010 FOXD4L6Q3SYB3 417 aaPredicted RBP26.25■■□□□ 1.79
PFDN2-201ENST00000368010 FOXD4L3Q6VB84 417 aaPredicted RBP26.25■■□□□ 1.79
PFDN2-201ENST00000368010 MYCT1Q8N699 235 aa26.25■■□□□ 1.79
PFDN2-201ENST00000368010 NECAB3Q96P71 396 aaPredicted RBP26.25■■□□□ 1.79
PFDN2-201ENST00000368010 MARCH5Q9NX47 278 aa26.25■■□□□ 1.79
PFDN2-201ENST00000368010 MYH15Q9Y2K3 1946 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms