RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 RWDD3Q9Y3V2 267 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 YIPF2Q9BWQ6 316 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 CLIC5Q9NZA1 410 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TDRKHQ9Y2W6 561 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 LAMC3Q9Y6N6 1575 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TBKBP1A7MCY6 615 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 EXOC3L4Q17RC7 722 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 OR9Q1Q8NGQ5 310 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 NFIBO00712 420 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TCF3P15923 654 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 POLA2Q14181 598 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 C4orf33Q8N1A6 199 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 SUN5Q8TC36 379 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 NSL1Q96IY1 281 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TMEM87BQ96K49 555 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 LZTS2Q9BRK4 669 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 MAPK4P31152 587 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC142Q17RM4 750 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 ANKRD27Q96NW4 1050 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TRIM8Q9BZR9 551 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 CACNA1FO60840 1977 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 KLHL41O60662 606 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TAS2R42Q7RTR8 314 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 KAT2BQ92831 832 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 NLRP1Q9C000 1473 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 DNAJC13O75165 2243 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 B2RBV5 119 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 KPNA2P52292 529 aaKnown RBP11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 RABL2BQ9UNT1 228 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 FOXN1O15353 648 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 RAD51CO43502 376 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TAF5LO75529 589 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TAF1BQ53T94 588 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 HDDC2Q7Z4H3 204 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 LINC00301Q8NCQ3 95 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 GJA10Q969M2 543 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 DEPDC7Q96QD5 511 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 ITIH6Q6UXX5 1313 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 F5H423 210 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 DLGAP5Q15398 846 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 FSCBQ5H9T9 825 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC39Q96DD0 335 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 FAM47DPA6NHR8 397 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 GATAD2AQ86YP4 633 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 NUP93Q8N1F7 819 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 KLHL20Q9Y2M5 609 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 E7ENQ6 273 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 SERPING1P05155 500 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 CDH3P22223 829 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TSSK1BQ9BXA7 367 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 KRT87PA6NCN2 255 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 AGTP01019 485 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TFAMQ00059 246 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 B3GNT6Q6ZMB0 384 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 SPICE1Q8N0Z3 855 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 F8W8V4 182 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 IDH3BO43837 385 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 GUCY1B2O75343 617 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 NARS2Q96I59 477 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 THAP9Q9H5L6 903 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 CENPAP49450 140 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 MCF2L2Q86YR7 1114 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 AMACRQ9UHK6 382 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 DDX25Q9UHL0 483 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 BTBD18B2RXH4 712 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 LBRQ14739 615 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 NLRP9Q7RTR0 991 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC4Q9HBW1 653 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TRPC7Q9HCX4 862 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 CLCA2Q9UQC9 943 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 LZTS3O60299 673 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 PTGDRQ13258 359 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ATL2Q8NHH9 583 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 BBS2Q9BXC9 721 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ASPSCR1Q9BZE9 553 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 NXF1Q9UBU9 619 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ARIH2O95376 493 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TRIM49P0CI25 452 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TRIM49CP0CI26 452 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms