RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PROB1E7EW31 1015 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 C2CD2LO14523 706 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 DDHD2O94830 711 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 CNPP09543 421 aaKnown RBP13.78□□□□□ -0.2
MRPL55-209ENST00000366735 ANKRD1Q15327 319 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 RTP3Q9BQQ7 232 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 RHOBTB2Q9BYZ6 727 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.78□□□□□ -0.2
MRPL55-209ENST00000366735 LIMCH1Q9UPQ0 1083 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-209ENST00000366735 IPPQ9Y573 584 aa13.78□□□□□ -0.2
MRPL55-209ENST00000366735 TSPAN1O60635 241 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 DGAT1O75907 488 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 C1RP00736 705 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-209ENST00000366735 KRT2P35908 639 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 MLH1P40692 756 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 PTENP60484 403 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 CYP4A11Q02928 519 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 POU5F1BQ06416 359 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 SCRN1Q12765 414 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 UBXN11Q5T124 520 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 TPH2Q8IWU9 490 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 INTS4Q96HW7 963 aaKnown RBP13.77□□□□□ -0.21
MRPL55-209ENST00000366735 DYDC2Q96IM9 177 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-209ENST00000366735 COLEC11Q9BWP8 271 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 CSRNP2Q9H175 543 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 GIT1Q9Y2X7 761 aa13.77□□□□□ -0.21
MRPL55-209ENST00000366735 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 CLUHO75153 1309 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 ARL5CA6NH57 179 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 INPPL1O15357 1258 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
MRPL55-209ENST00000366735 GBP2P32456 591 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-209ENST00000366735 NBL1P41271 181 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 GRIK3Q13003 919 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 CTTNQ14247 550 aaKnown RBP13.76□□□□□ -0.21
MRPL55-209ENST00000366735 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 GPR65Q8IYL9 337 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 HAS1Q92839 578 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 NXPE3Q969Y0 559 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-209ENST00000366735 ANKEF1Q9NU02 776 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 RGL1Q9NZL6 768 aa13.76□□□□□ -0.21
MRPL55-209ENST00000366735 WRAP73Q9P2S5 460 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-209ENST00000366735 ORC3Q9UBD5 711 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-209ENST00000366735 B4GALT3O60512 393 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 PFKFB2O60825 505 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 LILRB3O75022 631 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 AOC1P19801 751 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 SCNN1GP51170 649 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 DSG1Q02413 1049 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 DSC1Q08554 894 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 TRIM29Q14134 588 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 CALCRLQ16602 461 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 SLC27A1Q6PCB7 646 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
MRPL55-209ENST00000366735 NKD2Q969F2 451 aaPredicted RBP13.75□□□□□ -0.21
MRPL55-209ENST00000366735 GAD1Q99259 594 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
MRPL55-209ENST00000366735 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 SMOC2Q9H3U7 446 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 PIDD1Q9HB75 910 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 RXFP1Q9HBX9 757 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 WDR6Q9NNW5 1121 aaKnown RBP13.75□□□□□ -0.21
MRPL55-209ENST00000366735 MARCH5Q9NX47 278 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 PCDHA12Q9UN75 941 aa13.75□□□□□ -0.21
MRPL55-209ENST00000366735 CITO14578 2027 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
MRPL55-209ENST00000366735 CCDC195A0A1B0GUA6 201 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 PRR23AA6NEV1 266 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 TEX28O15482 410 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 NEMFO60524 1076 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 LYPLA2O95372 231 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 FOXK2Q01167 660 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 MBTD1Q05BQ5 628 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 SPIRE1Q08AE8 756 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 CAPSQ13938 189 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 USP41Q3LFD5 358 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 CWF19L1Q69YN2 538 aaKnown RBP13.74□□□□□ -0.21
MRPL55-209ENST00000366735 FUT10Q6P4F1 479 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 ZBTB8OSQ8IWT0 167 aa13.74□□□□□ -0.21
MRPL55-209ENST00000366735 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms