RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SEPT2Q15019 361 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 NOMO1Q15155 1222 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 PTPN21Q16825 1174 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 USP39Q53GS9 565 aaKnown RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 ANKS6Q68DC2 871 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 APBB1IPQ7Z5R6 666 aaPredicted RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 THEMISQ8N1K5 641 aaPredicted RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 MDGA1Q8NFP4 955 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 FBXO18Q8NFZ0 1043 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 OR2I1PQ8NGU4 316 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 IL17DQ8TAD2 202 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 ATXN2LQ8WWM7 1075 aaKnown RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 ST8SIA2Q92186 375 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 PGBD4Q96DM1 585 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 CDC5LQ99459 802 aaKnown RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 CPPED1Q9BRF8 314 aaPredicted RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 ADI1Q9BV57 179 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 TUBD1Q9UJT1 453 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 ZBTB21Q9ULJ3 1066 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 DNM3Q9UQ16 869 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 GIT1Q9Y2X7 761 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 KLRG2A4D1S0 409 aaPredicted RBP4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 MATN3O15232 486 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 CYP27B1O15528 508 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 XPOTO43592 962 aaKnown RBP4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 MFAP3LO75121 409 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 NDUFS2O75306 463 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 HK1P19367 917 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 ECHS1P30084 290 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 CRHR1P34998 444 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 SREBF1P36956 1147 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 SLC6A9P48067 706 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 APBA1Q02410 837 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 MGAT2Q10469 447 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 CRHR2Q13324 411 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 ODF1Q14990 250 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 CSRP2Q16527 193 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZXDCQ2QGD7 858 aaPredicted RBP4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 NRN1LQ496H8 165 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 MFSD14BQ5SR56 506 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 RNF207Q6ZRF8 634 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 C1orf210Q8IVY1 113 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 GSPT2Q8IYD1 628 aaKnown RBP4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 TRMT2AQ8IZ69 625 aaKnown RBP4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 OR7D4Q8NG98 312 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 STAG1Q8WVM7 1258 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 NRG4Q8WWG1 115 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 DPF2Q92785 391 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 GPR87Q9BY21 358 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 LDAHQ9H6V9 325 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 BCO1Q9HAY6 547 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 MYRFQ9Y2G1 1151 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 SIK3Q9Y2K2 1263 aa4.33□□□□□ -1.72
RNU4-48P-201ENST00000365559 XDHP47989 1333 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 IPO13O94829 963 aaKnown RBP4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 C1SP09871 688 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 TNFRSF1AP19438 455 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 PTPN7P35236 360 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 MAN2A2P49641 1150 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 PTTG1IPP53801 180 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 ANAPC15P60006 121 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 FAM180AQ6UWF9 173 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 HTR3DQ70Z44 454 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 DOK3Q7L591 496 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 GPRIN1Q7Z2K8 1008 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 FAM83AQ86UY5 434 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 PQLC1Q8N2U9 271 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 OR52N2Q8NGI0 321 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 STON2Q8WXE9 905 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 SSH1Q8WYL5 1049 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 TEKT5Q96M29 485 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 MNTQ99583 582 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 PDCD2LQ9BRP1 358 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 KCNH6Q9H252 994 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 CEP72Q9P209 647 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 INTUQ9ULD6 942 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 MRFAP1Q9Y605 127 aa4.32□□□□□ -1.72
RNU4-48P-201ENST00000365559 ATRNL1Q5VV63 1379 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 AMHP03971 560 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 PER3P56645 1201 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 IGBP1P78318 339 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 KRT85P78386 507 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 DGCR2P98153 550 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 CNGB1Q14028 1251 aaPredicted RBP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 DBX2Q6ZNG2 339 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 PDZD4Q76G19 769 aaPredicted RBP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 ZNF572Q7Z3I7 529 aaPredicted RBP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 PNMA8AQ86V59 439 aaPredicted RBP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 TMPRSS6Q8IU80 811 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 SLC35B2Q8TB61 432 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 UHRF1Q96T88 793 aaPredicted RBP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 SLC13A1Q9BZW2 595 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 HDAC5Q9UQL6 1122 aa4.31□□□□□ -1.72
RNU4-48P-201ENST00000365559 B5MCH6 92 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms