RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 POLR3FQ9H1D9 316 aaPredicted RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 KLHL11Q9NVR0 708 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 PFASO15067 1338 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 DDX3XO00571 662 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 PJA2O43164 708 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SLC26A4O43511 780 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 RNF8O76064 485 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SFNP31947 248 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 C6orf163Q5TEZ5 329 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 SRRM1Q8IYB3 904 aaKnown RBP13.1□□□□□ -0.31
COL20A1-201ENST00000358894 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 EPN3Q9H201 632 aa13.1□□□□□ -0.31
COL20A1-201ENST00000358894 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 POLR2BP30876 1174 aaKnown RBP13.09□□□□□ -0.31
COL20A1-201ENST00000358894 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
COL20A1-201ENST00000358894 CALN1Q9BXU9 219 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 WNT8AQ9H1J5 351 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 TISP43B9A030 160 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 SYF2O95926 243 aaKnown RBP13.09□□□□□ -0.31
COL20A1-201ENST00000358894 POLE2P56282 527 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 DHX34Q14147 1143 aaKnown RBP13.09□□□□□ -0.31
COL20A1-201ENST00000358894 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
COL20A1-201ENST00000358894 OTOP1Q7RTM1 612 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 POP1Q99575 1024 aaKnown RBP13.09□□□□□ -0.31
COL20A1-201ENST00000358894 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 TXNDC16Q9P2K2 825 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 ABCC6O95255 1503 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 CASC4Q6P4E1 433 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 MDM1Q8TC05 714 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 ERP44Q9BS26 406 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 TTYH3Q9C0H2 523 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 OLFML3Q9NRN5 406 aa13.09□□□□□ -0.31
COL20A1-201ENST00000358894 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 SGPL1O95470 568 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 CNGA1P29973 690 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 HNRNPH3P31942 346 aaKnown RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 KRT17Q04695 432 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 GABPAQ06546 454 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 TSNAXIP1Q2TAA8 658 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 TLR2O60603 784 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 NR3C2P08235 984 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 ARMC9Q7Z3E5 817 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 PIK3R5Q8WYR1 880 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 P3H4Q92791 437 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 STMN2Q93045 179 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 CARD9Q9H257 536 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 SAYSD1Q9NPB0 183 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 GOLGA8MH3BSY2 632 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 NKRFO15226 690 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 GNA15P30679 374 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 CBWD6Q4V339 395 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 LRRC15Q8TF66 581 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 C18orf8Q96DM3 657 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 GGT7Q9UJ14 662 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
COL20A1-201ENST00000358894 PPP1R9AQ9ULJ8 1098 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
COL20A1-201ENST00000358894 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 M0R2N6 131 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 YWHAEP62258 255 aaKnown RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SMC6Q96SB8 1091 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SUDS3Q9H7L9 328 aaPredicted RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 DBR1Q9UK59 544 aaKnown RBP13.07□□□□□ -0.32
COL20A1-201ENST00000358894 USH1CQ9Y6N9 552 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 H7C0C1 242 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 PHF2O75151 1096 aa13.07□□□□□ -0.32
COL20A1-201ENST00000358894 ATP5OP48047 213 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms