RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ANGPT2O15123 496 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 CDC27P30260 824 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 COPAP53621 1224 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 CAPRIN1Q14444 709 aaKnown RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 TTC33Q6PID6 262 aaPredicted RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SPDYE16A6NNV3 312 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ZBED4O75132 1171 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SRGNP10124 158 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 CDH2P19022 906 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ATP2C1P98194 919 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 NAB2Q15742 525 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SPDYE2Q495Y8 402 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 GLG1Q92896 1179 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 GJB4Q9NTQ9 266 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PVALEFA0A1B0GWK0 134 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF233A6NK53 670 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ZCCHC18P0CG32 403 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 HLA-DPA1P20036 260 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 P3H1Q32P28 736 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TTC8Q8TAM2 541 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TFCP2L1Q9NZI6 479 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 FTLP02792 175 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 FMR1Q06787 632 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TSTA3Q13630 321 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 BARGINQ6ZT62 677 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 GALNT4Q8N4A0 578 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SH3GL1Q99961 368 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ERP44Q9BS26 406 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 KLHL25Q9H0H3 589 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SESN1Q9Y6P5 492 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 DLG5Q8TDM6 1919 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 CHD2O14647 1828 aaKnown RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 DLGAP3O95886 979 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PCCAP05165 728 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PYGLP06737 847 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ERFP50548 548 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ROR1Q01973 937 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 BTKQ06187 659 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 INAQ16352 499 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TRMT5Q32P41 509 aaKnown RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 KIRREL3Q8IZU9 778 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 OR2W6PQ8NHA6 318 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 CAVIN3Q969G5 261 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 KRT16P08779 473 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 DEPDC1Q5TB30 811 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 RAD9BQ6WBX8 426 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TRIM72Q6ZMU5 477 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 YTHDF3Q7Z739 585 aaKnown RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SETD3Q86TU7 594 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ELOA2Q8IYF1 753 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 RFWD2Q8NHY2 731 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 DPF2Q92785 391 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TRAPPC9Q96Q05 1148 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TRIM51Q9BSJ1 452 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 NDEL1Q9GZM8 345 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 VPS11Q9H270 941 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 LY9Q9HBG7 655 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 FAM153AQ9UHL3 310 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SETBP1Q9Y6X0 1596 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PJA2O43164 708 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PSMC3P17980 439 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TPP2P29144 1249 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 DRAP1Q14919 205 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 AASDHQ4L235 1098 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 C4orf50Q6ZRC1 276 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 FRMD5Q7Z6J6 570 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 MANSC1Q9H8J5 431 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 IP6K2Q9UHH9 426 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 THRAP3Q9Y2W1 955 aaKnown RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 CDY2AQ9Y6F7 541 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 CDY1Q9Y6F8 540 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 FAM200BP0CF97 657 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 CALB2P22676 271 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SLC1A1P43005 524 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 RAB14P61106 215 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 REXO1L1PQ8IX06 675 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 TNIP2Q8NFZ5 429 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 PABPC3Q9H361 631 aaKnown RBP9.26□□□□□ -0.93
COL6A6-201ENST00000358511 ANKRD26Q9UPS8 1709 aa9.26□□□□□ -0.93
COL6A6-201ENST00000358511 SKAP2O75563 359 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 RPS6KA5O75582 802 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 C1orf54Q8WWF1 131 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 RAD54LQ92698 747 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PDS5AQ29RF7 1337 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF189O75820 626 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ADAMTS2O95450 1211 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PECAM1P16284 738 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 KNOP1Q1ED39 458 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 HABP4Q5JVS0 413 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TMC5Q6UXY8 1006 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 NMD3Q96D46 503 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 SEPT9Q9UHD8 586 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 B2RBV5 119 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms