RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 SLC1A1P43005 524 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 KRT76Q01546 638 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 KLC1Q07866 573 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 EPHA7Q15375 998 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 HIF1AQ16665 826 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 KYNUQ16719 465 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 ANO5Q75V66 913 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 MDM1Q8TC05 714 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 ERP27Q96DN0 273 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 CYP26B1Q9NR63 512 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 TTI2Q6NXR4 508 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 CYB5D1Q6P9G0 228 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 BTBD6Q96KE9 485 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC13A1Q9BZW2 595 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 CARD9Q9H257 536 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 VPS11Q9H270 941 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 MRPL46Q9H2W6 279 aaKnown RBP16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 LMTK2Q8IWU2 1503 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 CRKP46108 304 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 RABGAP1LQ5R372 815 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 SASH3O75995 380 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 HSPA8P11142 646 aaKnown RBP16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 KCNJ1P48048 391 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 WWP1Q9H0M0 922 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 ATP6V0A4Q9HBG4 840 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 ALG13Q9NP73 1137 aaKnown RBP16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 NAGPAQ9UK23 515 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 NUB1Q9Y5A7 615 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 UBE4BO95155 1302 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 COL15A1P39059 1388 aa16.57■□□□□ 0.24
TRAPPC11-202ENST00000357207 OCRLQ01968 901 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 TAF1BQ53T94 588 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 KLHDC7AQ5VTJ3 777 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 KIF2BQ8N4N8 673 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 FGD4Q96M96 766 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 GNGT2O14610 69 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 STMN1P16949 149 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 CNGA1P29973 690 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 CDK17Q00537 523 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 KCTD2Q14681 263 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 RFX8Q6ZV50 586 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 C3orf20Q8ND61 904 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC26A7Q8TE54 656 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 SH3GL3Q99963 347 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 KPNA7A9QM74 516 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 HERVK_113P62684 666 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 TUFT1Q9NNX1 390 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 DTX3LQ8TDB6 740 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 OLFM3Q96PB7 478 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 ADAM33Q9BZ11 813 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 PABPC3Q9H361 631 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 CYP4F11Q9HBI6 524 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 NOD2Q9HC29 1040 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 CD248Q9HCU0 757 aa16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 DDX56Q9NY93 547 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-202ENST00000357207 CASP2P42575 452 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 PSMC1P62191 440 aaKnown RBP16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 NTRK3Q16288 839 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC30A5Q8TAD4 765 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 CCDC195A0A1B0GUA6 201 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 COMTP21964 271 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 BCAR1P56945 870 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF699Q32M78 642 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 C4orf33Q8N1A6 199 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 ABCB11O95342 1321 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 ENO4A6NNW6 628 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 PI4K2BG5E9Z4 385 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.244e-9■■□□□ 13.6
TRAPPC11-202ENST00000357207 FAM182BQ5T319 152 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 ATP6V1E2Q96A05 226 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 NRBF2Q96F24 287 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 VPS39Q96JC1 886 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF341Q9BYN7 854 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 PARVAQ9NVD7 372 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
TRAPPC11-202ENST00000357207 ABL1P00519 1130 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 IL1RL1Q01638 556 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 ACAD11Q709F0 780 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 BRINP3Q76B58 766 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 TPCN2Q8NHX9 752 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 CCDC124Q96CT7 223 aaKnown RBP16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 FOXP3Q9BZS1 431 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
TRAPPC11-202ENST00000357207 IQGAP1P46940 1657 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms