RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CNGA3Q16281 694 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PYROXD1Q8WU10 500 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 KLHL4Q9C0H6 718 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 KBTBD4Q9NVX7 518 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 XPO1O14980 1071 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ALADP13716 330 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GARSP41250 739 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SLC34A1Q06495 639 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 CDK18Q07002 472 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 MMEL1Q495T6 779 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TBC1D9BQ66K14 1250 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TTC39CQ8N584 583 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ATP6V0A1Q93050 837 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ADAM22Q9P0K1 906 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 APOBEC2Q9Y235 224 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GOLGA8TH3BQL2 631 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PDE8AO60658 829 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 GOLGA8HP0CJ92 632 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MCL1Q07820 350 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PDXDC2PQ6P474 469 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ACAD11Q709F0 780 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ZBTB38Q8NAP3 1195 aaPredicted RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PLEKHG4BQ96PX9 1271 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 GCOM2Q9BZD3 368 aaPredicted RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 LACRTQ9GZZ8 138 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 DNAAF2Q9NVR5 837 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 STRIP2Q9ULQ0 834 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CAPN6Q9Y6Q1 641 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CCNB1P14635 433 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 TARSP26639 723 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 POLD1P28340 1107 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PTPN12Q05209 780 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 NR5A1Q13285 461 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 RSPH3Q86UC2 560 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 TRIM63Q969Q1 353 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 AIFM3Q96NN9 605 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MAK16Q9BXY0 300 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 EEF2P13639 858 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 SOX5P35711 763 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PHEXP78562 749 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PPP1R15BQ5SWA1 713 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 NET1Q7Z628 596 aaPredicted RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 FAM133AQ8N9E0 248 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MPP4Q96JB8 637 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MAGED4Q96JG8 741 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF570Q96NI8 536 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 STK33Q9BYT3 514 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 C1orf112Q9NSG2 853 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 BIN2Q9UBW5 565 aaPredicted RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MTMR7Q9Y216 660 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 FER1L4A9Z1Z3 1794 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 SORBS3O60504 671 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 TJP3O95049 919 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 INHBAP08476 426 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 IDO1P14902 403 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF12P17014 697 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 OCA2Q04671 838 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ATAD3BQ5T9A4 648 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CCDC124Q96CT7 223 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CYTH2Q99418 400 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 HSD3B7Q9H2F3 369 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ABCF3Q9NUQ8 709 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MROH7Q68CQ1 1323 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CFAP69A5D8W1 941 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 POLR2BP30876 1174 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 RPL5P46777 297 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MYL7Q01449 175 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ATP8B4Q8TF62 1192 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CSRNP1Q96S65 589 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 OSBPL7Q9BZF2 842 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 SHOC2Q9UQ13 582 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ERVV-1B6SEH8 477 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 GRAMD1BQ3KR37 738 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 SNX30Q5VWJ9 437 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ASAP3Q8TDY4 903 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 RAD54LQ92698 747 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 MTBPQ96DY7 904 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 GJB4Q9NTQ9 266 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 CAPN9O14815 690 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 DLG4P78352 724 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 GRM4Q14833 912 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 LRRC14Q15048 493 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 KYNUQ16719 465 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 LRRC74BQ6ZQY2 392 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 RASSF3Q86WH2 238 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 WDR75Q8IWA0 830 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 TRABDQ9H4I3 376 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 STX18Q9P2W9 335 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ARHGAP26Q9UNA1 814 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ORC6Q9Y5N6 252 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 A0A0G2JND7 137 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 RAPGEF3O95398 923 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PEX5P50542 639 aa6.97□□□□□ -1.29
TRIM38-201ENST00000357085 ADARP55265 1226 aaKnown RBP6.97□□□□□ -1.29
TRIM38-201ENST00000357085 PTPROQ16827 1216 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms