RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 STAT4Q14765 748 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 NECTIN1Q15223 517 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 SMAD1Q15797 465 aaKnown RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 CNGA3Q16281 694 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 SPDYE7PQ495Y7 208 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 GJC2Q5T442 439 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 ENOSF1Q7L5Y1 443 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 THAP11Q96EK4 314 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 RMDN3Q96TC7 470 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 SUPT3HO75486 399 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 MOCS2O96007 188 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 ENO1P06733 434 aaKnown RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 CDH2P19022 906 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 S100A5P33763 92 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 ARSEP51690 589 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 FAM102AQ5T9C2 384 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 MTHFD1LQ6UB35 978 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 PRMT1Q99873 361 aaKnown RBP15.73■□□□□ 0.11
LMX1B-201ENST00000355497 TRIM62Q9BVG3 475 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 SENP1Q9P0U3 644 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 FBXO40Q9UH90 709 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 GRAPQ13588 217 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 DEPDC1Q5TB30 811 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 COG1Q8WTW3 980 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 SLC10A4Q96EP9 437 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 FAM20AQ96MK3 541 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 HDAC6Q9UBN7 1215 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 CTTNBP2Q8WZ74 1663 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 TARSL2A2RTX5 802 aaKnown RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 STK25O00506 426 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 MEFVO15553 781 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 SFNP31947 248 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 WASHC5Q12768 1159 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF235Q14590 738 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ANKRD40Q6AI12 368 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF746Q6NUN9 644 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 SH3RF3Q8TEJ3 882 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 SLC7A5P2Q9GIP4 190 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 C5orf58C9J3I9 102 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 TBC1D4O60343 1298 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 COA1Q9GZY4 146 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 POLR3FQ9H1D9 316 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ERVV-1B6SEH8 477 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 FGFR4P22455 802 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 RAD51Q06609 339 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 RHPN2Q8IUC4 686 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 RFWD2Q8NHY2 731 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF507Q8TCN5 953 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 RMDN1Q96DB5 314 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 DTNBP1Q96EV8 351 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ATXN7L3BQ96GX2 97 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 GH2P01242 217 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 GSNP06396 782 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 CASP1P29466 404 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 HMOX2P30519 316 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 HIF1AQ16665 826 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF280CQ8ND82 737 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 SH3GL3Q99963 347 aa15.72■□□□□ 0.11
LMX1B-201ENST00000355497 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
LMX1B-201ENST00000355497 RINLQ6ZS11 566 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 FAM196AQ6ZSG2 479 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 RBM46Q8TBY0 533 aaKnown RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 FAM217BQ9NTX9 383 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 NEDD4P46934 1319 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 RABGAP1LQ5R372 815 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 CIAPIN1Q6FI81 312 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 PODNQ7Z5L7 613 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 MFN1Q8IWA4 741 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ARMC2Q8NEN0 867 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ASAP3Q8TDY4 903 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 SCFD1Q8WVM8 642 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 TSSK1BQ9BXA7 367 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 TRABDQ9H4I3 376 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 BSDC1Q9NW68 430 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ARL2BPQ9Y2Y0 163 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 CAB39Q9Y376 341 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ATP9BO43861 1147 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 ASNSP08243 561 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 AP3M2P53677 418 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 CDH6P55285 790 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 KDSRQ06136 332 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 PKN3Q6P5Z2 889 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 SYDE1Q6ZW31 735 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 GPD1LQ8N335 351 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 TBC1D19Q8N5T2 526 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 RFFLQ8WZ73 363 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 SPON2Q9BUD6 331 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 MDH1BQ5I0G3 518 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 KHDRBS2Q5VWX1 349 aaKnown RBP15.71■□□□□ 0.11
LMX1B-201ENST00000355497 EFHBQ8N7U6 833 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 PPP1R36Q96LQ0 422 aa15.71■□□□□ 0.11
LMX1B-201ENST00000355497 OSBPL5Q9H0X9 879 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms