RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ZBTB8OSQ8IWT0 167 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 RNPEPQ9H4A4 650 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF215Q9UL58 517 aaPredicted RBP18.67■□□□□ 0.58
VPS13B-201ENST00000355155 CNTNAP2Q9UHC6 1331 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.66■□□□□ 0.58
VPS13B-201ENST00000355155 PRLRP16471 622 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 TUBB4BP68371 445 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 TAF1CQ15572 869 aaPredicted RBP18.66■□□□□ 0.58
VPS13B-201ENST00000355155 SAAL1Q96ER3 474 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 SUCLA2Q9P2R7 463 aaPredicted RBP18.66■□□□□ 0.58
VPS13B-201ENST00000355155 A0A0A6YYK5 440 aaPredicted RBP18.66■□□□□ 0.58
VPS13B-201ENST00000355155 TOM1L1O75674 476 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 C4BPAP04003 597 aaKnown RBP18.66■□□□□ 0.58
VPS13B-201ENST00000355155 RDH13Q8NBN7 331 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 AFG1LQ8WV93 481 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
VPS13B-201ENST00000355155 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 CPA4Q9UI42 421 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 CDC23Q9UJX2 597 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 CASP8AP2Q9UKL3 1982 aa18.66■□□□□ 0.58
VPS13B-201ENST00000355155 ACKR2O00590 384 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 GFPT1Q06210 699 aaPredicted RBP18.65■□□□□ 0.58
VPS13B-201ENST00000355155 ZACNQ401N2 412 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 TRAPPC11Q7Z392 1133 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 TRIM58Q8NG06 486 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 CGRRF1Q99675 332 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 A0A087X0T9 212 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 FAM228BP0C875 321 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 GCLMP48507 274 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 GCNT1Q02742 428 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 BRSK2Q8IWQ3 736 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 FAM71AQ8IYT1 594 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 FBXL13Q8NEE6 735 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 HELQQ8TDG4 1101 aa18.65■□□□□ 0.58
VPS13B-201ENST00000355155 GOLGA8IPA6NC78 632 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 GOLGA8JA6NMD2 632 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 EVI5O60447 810 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 INSRRP14616 1297 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 MBTD1Q05BQ5 628 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 SURF1Q15526 300 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 TDRD12Q587J7 1177 aaKnown RBP18.64■□□□□ 0.58
VPS13B-201ENST00000355155 GJB7Q6PEY0 223 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 TRMT1LQ7Z2T5 733 aaKnown RBP18.64■□□□□ 0.58
VPS13B-201ENST00000355155 SHC3Q92529 594 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 SECISBP2LQ93073 1101 aaKnown RBP18.64■□□□□ 0.58
VPS13B-201ENST00000355155 BICD1Q96G01 975 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 CALR3Q96L12 384 aaKnown RBP18.64■□□□□ 0.58
VPS13B-201ENST00000355155 APBA2Q99767 749 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 TRIM10Q9UDY6 481 aa18.64■□□□□ 0.58
VPS13B-201ENST00000355155 RALGAPA2Q2PPJ7 1873 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 RGS2P41220 211 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 DGKDQ16760 1214 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 WHAMMP3Q1A5X7 153 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 EFCAB12Q6NXP0 572 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 ARHGEF19Q8IW93 802 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 ZNF516Q92618 1163 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 SEMA4DQ92854 862 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 TARS2Q9BW92 718 aaKnown RBP18.64■□□□□ 0.57
VPS13B-201ENST00000355155 RAB20Q9NX57 234 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 NAGPAQ9UK23 515 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 TRPC6Q9Y210 931 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 TNFSF13BQ9Y275 285 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 RRN3P2A6NIE6 340 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 HAS3O00219 553 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 MARK3P27448 753 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 MAPK6Q16659 721 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 SV2AQ7L0J3 742 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 OR6J1Q8NGC5 347 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 FAM213AQ9BRX8 229 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 GUCA1BQ9UMX6 200 aa18.64■□□□□ 0.57
VPS13B-201ENST00000355155 TADA3O75528 432 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 PRKCBP05771 671 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 NLRP11P59045 1033 aaKnown RBP18.63■□□□□ 0.57
VPS13B-201ENST00000355155 MTHFD1LQ6UB35 978 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 ZNF572Q7Z3I7 529 aaPredicted RBP18.63■□□□□ 0.57
VPS13B-201ENST00000355155 VPS36Q86VN1 386 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 PRMT7Q9NVM4 692 aaPredicted RBP18.63■□□□□ 0.57
VPS13B-201ENST00000355155 PCDHGC5Q9Y5F6 944 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 EFCAB8A8MWE9 144 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 DDX3XO00571 662 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS13B-201ENST00000355155 ADCY6O43306 1168 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 URI1O94763 535 aaPredicted RBP18.63■□□□□ 0.57
VPS13B-201ENST00000355155 F2P00734 622 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 CDC42EP1Q00587 391 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 UBE2Q2Q8WVN8 375 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 FAXDC2Q96IV6 333 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 FLRT1Q9NZU1 646 aa18.63■□□□□ 0.57
VPS13B-201ENST00000355155 CPSF3Q9UKF6 684 aaKnown RBP18.63■□□□□ 0.57
VPS13B-201ENST00000355155 NCANO14594 1321 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 H3BRB1 525 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 OGTO15294 1046 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 AMHR2Q16671 573 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 MARCH8Q5T0T0 291 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
VPS13B-201ENST00000355155 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
VPS13B-201ENST00000355155 MSTO1Q9BUK6 570 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 TUT1Q9H6E5 874 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms